* using log directory 'd:/RCompile/CRANincoming/R-devel/GeomArchetypal.Rcheck' * using R Under development (unstable) (2024-05-30 r86651 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'GeomArchetypal/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GeomArchetypal' version '1.0.1' * checking CRAN incoming feasibility ... NOTE Maintainer: 'Demetris Christopoulos ' New submission Possibly misspelled words in DESCRIPTION: Breiman (21:17) Christopoulos (23:5) DT (23:20) LK (22:24) Morup (22:5) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'GeomArchetypal' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... ERROR Running examples in 'GeomArchetypal-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: BLB_archetypal > ### Title: Archetypal Analysis using the Bag of Little Bootstraps > ### Aliases: BLB_archetypal > > ### ** Examples > > # Load package > library(GeomArchetypal) > # Load data > data("gallupGPS6") > # draw a small sample > set.seed(2024) > df <- gallupGPS6[sample(1:nrow(gallupGPS6),35000,replace = FALSE),] > # invent a grouping variable > df$grp <- cut(df$risktaking, breaks = 2) > test <- BLB_archetypal(df = df, + group_var = "grp", + aa_var = c("patience","risktaking","trust"), + n = 1, r = 2, n_core = 1, + diag_less = 1e-2) warning: generating 2 bootstraps but 440 required for 2 sigma confidence intervals drawing subsamples of size 267 without replacement from each of 2 groups for a total subsample size of 534 1 subsamples and 2 bootstraps per subsample = 2 bootstraps in total processed in batches of 1 (= n_core) subsample 1 of 1 batch 1 * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... OK * checking PDF version of manual ... [15s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE