* using log directory 'd:/RCompile/CRANincoming/R-devel/GeoLight.Rcheck' * using R Under development (unstable) (2024-01-29 r85841 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 12.3.0 GNU Fortran (GCC) 12.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'GeoLight/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'GeoLight' version '2.1.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Simeon Lisovski ' New submission Package was archived on CRAN Possibly misspelled words in DESCRIPTION: Geolocator (3:32) CRAN repository db overrides: X-CRAN-Comment: Archived on 2021-11-14 as check problems were not corrected in time. Package has a VignetteBuilder field but no prebuilt vignette index. Package CITATION file contains call(s) to old-style personList() or as.personList(). Please use c() on person objects instead. Package CITATION file contains call(s) to old-style citEntry(). Please use bibentry() instead. Found the following (possibly) invalid file URIs: URI: www.esrl.noaa.gov/gmd/grad/solcalc/ From: man/solar.Rd URI: www.esrl.noaa.gov/gmd/grad/solcalc/ From: man/zenith.Rd * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'GeoLight' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... NOTE Problems with news in 'NEWS': Cannot process chunk/lines: Please view package vignette "GeoLight2.0" for detailed description on changes within functions and about additional functionalities. * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [28s] NOTE siteMap: no visible binding for global variable '.' siteMap : : no visible binding for global variable '.' tripMap: no visible binding for global variable '.' Undefined global functions or variables: . * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of 'data' directory ... OK * checking data for non-ASCII characters ... OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [10s] ERROR Running examples in 'GeoLight-Ex.R' failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: siteMap > ### Title: Draws sites of residency and adds a convex hull > ### Aliases: siteMap > > ### ** Examples > > data(hoopoe2) > hoopoe2$tFirst <- as.POSIXct(hoopoe2$tFirst, tz = "GMT") > hoopoe2$tSecond <- as.POSIXct(hoopoe2$tSecond, tz = "GMT") > crds <- coord(hoopoe2, degElevation = -6) Note: Out of 340 twilight pairs, the calculation of 22 latitudes failed (6 %)> filter <- distanceFilter(hoopoe2, distance = 30) Note: 92 of 318 positions were filtered (28 %)> site <- changeLight(hoopoe2, rise.prob = 0.1, set.prob = 0.1, plot = FALSE, + summary = FALSE)$site > siteMap(crds[filter,], site[filter], linewidth=2, shape=20, size=0.5, main="hoopoe2") The rnaturalearthdata package needs to be installed. Installing the rnaturalearthdata package. Installing package into 'D:/temp/Rtmp0wdROR/RLIBS_1651c75b81d81' (as 'lib' is unspecified) Error in value[[3L]](cond) : Failed to install the rnaturalearthdata package. Please try installing the package for yourself using the following command: install.packages("rnaturalearthdata") Calls: siteMap ... tryCatch -> tryCatchList -> tryCatchOne -> Execution halted * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 3 NOTEs