Package check result: OK

Changes to worse in reverse depends:

Package: chillR
Check: examples
New result: ERROR
  Running examples in ‘chillR-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: phenologyFitter
  > ### Title: phenologyFitter
  > ### Aliases: phenologyFitter
  > 
  > ### ** Examples
  > 
  > ## this example does not make sense as a fit, but demonstrates
  > ## how to use `phenologyFitter`
  > data(KA_weather)
  > data(KA_bloom)
  > hourtemps <- stack_hourly_temps(KA_weather, latitude=50.4)
  > SeasonList <- genSeasonList(hourtemps$hourtemps, years=c(2007,2008))
  > par <- c(40, 190, 0.5, 25, 3372.8, 9900.3, 6319.5, 5.939917e13, 4, 36, 4, 1.6)
  > upper <- c(41, 200, 1, 30, 4000, 10000, 7000, 6.e13, 10, 40, 10, 50)
  > lower <- c(38, 180, 0.1, 0, 3000, 9000, 6000, 5.e13, 0, 0, 0, 0.05)
  > X <- phenologyFitter(par.guess=par, bloomJDays=KA_bloom$pheno[c(24,25)], 
  +   SeasonList=SeasonList, lower=lower, upper=upper,
  +   control=list(smooth=FALSE, verbose=TRUE, maxit=10, nb.stop.improvement=5))
  Loading required namespace: parallel
  Error in GenSA::GenSA(par = par.guess, fn = chifull, bloomJDays = bloomJDays,  : 
    bad value
  Calls: phenologyFitter -> <Anonymous>
  Execution halted

Package: chillR
Check: re-building of vignette outputs
New result: ERROR
  Error(s) in re-building vignettes:
    ...
  --- re-building ‘PhenoFlex.Rmd’ using rmarkdown
  
  Quitting from PhenoFlex.Rmd:127-134 [unnamed-chunk-8]
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  <error/rlang_error>
  Error in `GenSA::GenSA()`:
  ! bad value
  ---
  Backtrace:
      ▆
   1. └─chillR::phenologyFitter(...)
   2.   └─GenSA::GenSA(...)
  ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
  
  Error: processing vignette 'PhenoFlex.Rmd' failed with diagnostics:
  bad value
  --- failed re-building ‘PhenoFlex.Rmd’
  
  --- re-building ‘hourly_temperatures.Rmd’ using rmarkdown
  [WARNING] Deprecated: --highlight-style. Use --syntax-highlighting instead.
  --- finished re-building ‘hourly_temperatures.Rmd’
  
  SUMMARY: processing the following file failed:
    ‘PhenoFlex.Rmd’
  
  Error: Vignette re-building failed.
  Execution halted

Package: mlr3tuning
Check: examples
New result: ERROR
  Running examples in ‘mlr3tuning-Ex.R’ failed
  The error most likely occurred in:
  
  > base::assign(".ptime", proc.time(), pos = "CheckExEnv")
  > ### Name: mlr_tuners_gensa
  > ### Title: Hyperparameter Tuning with Generalized Simulated Annealing
  > ### Aliases: mlr_tuners_gensa TunerBatchGenSA
  > 
  > ### ** Examples
  > 
  > # Hyperparameter Optimization
  > 
  > # load learner and set search space
  > learner = lrn("classif.rpart",
  +   cp = to_tune(1e-04, 1e-1, logscale = TRUE)
  + )
  > 
  > # run hyperparameter tuning on the Palmer Penguins data set
  > instance = tune(
  +   tuner = tnr("gensa"),
  +   task = tsk("penguins"),
  +   learner = learner,
  +   resampling = rsmp("holdout"),
  +   measure = msr("classif.ce"),
  +   term_evals = 10
  + )
  INFO  [18:46:08.882] [bbotk] Starting to optimize 1 parameter(s) with '<OptimizerBatchGenSA>' and '<TerminatorEvals> [n_evals=10, k=0]'
  INFO  [18:46:08.887] [bbotk] Evaluating 1 configuration(s)
  INFO  [18:46:08.896] [mlr3] Running benchmark with 1 resampling iterations
  INFO  [18:46:08.910] [mlr3] Applying learner 'classif.rpart' on task 'penguins' (iter 1/1)
  INFO  [18:46:08.938] [mlr3] Finished benchmark
  INFO  [18:46:08.984] [bbotk] Result of batch 1:
  INFO  [18:46:08.987] [bbotk]         cp classif.ce warnings errors runtime_learners
  INFO  [18:46:08.987] [bbotk]  -4.355717 0.05217391        0      0            0.013
  INFO  [18:46:08.987] [bbotk]                                 uhash
  INFO  [18:46:08.987] [bbotk]  7b4355a4-934b-43fd-a228-249eee4021c4
  INFO  [18:46:08.995] [bbotk] Evaluating 1 configuration(s)
  INFO  [18:46:09.004] [mlr3] Running benchmark with 1 resampling iterations
  INFO  [18:46:09.014] [mlr3] Applying learner 'classif.rpart' on task 'penguins' (iter 1/1)
  INFO  [18:46:09.038] [mlr3] Finished benchmark
  INFO  [18:46:09.082] [bbotk] Result of batch 2:
  INFO  [18:46:09.085] [bbotk]         cp classif.ce warnings errors runtime_learners
  INFO  [18:46:09.085] [bbotk]  -8.393144 0.05217391        0      0            0.014
  INFO  [18:46:09.085] [bbotk]                                 uhash
  INFO  [18:46:09.085] [bbotk]  bbd31f96-2d9a-46d8-bbcb-a56db784ca54
  INFO  [18:46:09.093] [bbotk] Evaluating 1 configuration(s)
  INFO  [18:46:09.102] [mlr3] Running benchmark with 1 resampling iterations
  INFO  [18:46:09.113] [mlr3] Applying learner 'classif.rpart' on task 'penguins' (iter 1/1)
  INFO  [18:46:09.131] [mlr3] Finished benchmark
  INFO  [18:46:09.173] [bbotk] Result of batch 3:
  INFO  [18:46:09.176] [bbotk]        cp classif.ce warnings errors runtime_learners
  INFO  [18:46:09.176] [bbotk]  -6.20367 0.05217391        0      0            0.008
  INFO  [18:46:09.176] [bbotk]                                 uhash
  INFO  [18:46:09.176] [bbotk]  5e9fc5ec-d998-4c46-8b1e-b5f6e7d5e552
  Error in GenSA::GenSA(par = par, fn = inst$objective_function, lower = inst$search_space$lower,  : 
    bad value
  Calls: tune ... <Anonymous> -> .__OptimizerBatchGenSA__.optimize -> <Anonymous>
  Execution halted