* using log directory 'd:/RCompile/CRANincoming/R-devel/GeDS.Rcheck'
* using R Under development (unstable) (2023-11-29 r85646 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 12.3.0
    GNU Fortran (GCC) 12.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'GeDS/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'GeDS' version '0.1.4'
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Emilio Guillen <emilio.saenz-guillen@bayes.city.ac.uk>'

New maintainer:
  Emilio Guillen <emilio.saenz-guillen@bayes.city.ac.uk>
Old maintainer(s):
  Andrea Lattuada <Andrea.Lattuada@unicatt.it>

Package CITATION file contains call(s) to old-style personList() or
as.personList().  Please use c() on person objects instead.
Package CITATION file contains call(s) to old-style citEntry().  Please
use bibentry() instead.

Found the following (possibly) invalid URLs:
  URL: http://github.com/alattuada/GeDS (moved to https://github.com/alattuada/GeDS)
    From: DESCRIPTION
    Status: 301
    Message: Moved Permanently
  URL: http://github.com/alattuada/GeDS/issues (moved to https://github.com/alattuada/GeDS/issues)
    From: DESCRIPTION
    Status: 301
    Message: Moved Permanently
  URL: http://openaccess.city.ac.uk/12418/ (moved to https://openaccess.city.ac.uk/12418/)
    From: man/BaFe2As2.Rd
    Status: 301
    Message: Moved Permanently
  URL: http://openaccess.city.ac.uk/18460/ (moved to https://openaccess.city.ac.uk/18460/)
    From: man/Fitters.Rd
          man/GGeDS.Rd
          man/GeDS-class.Rd
          man/GeDS-package.Rd
          man/SplineReg.Rd
    Status: 301
    Message: Moved Permanently
  URL: http://openaccess.city.ac.uk/id/eprint/2372 (moved to https://openaccess.city.ac.uk/id/eprint/2372)
    From: man/SplineReg.Rd
    Status: 301
    Message: Moved Permanently
  URL: https://link.springer.com/article/10.1007%2Fs00180-015-0621-7 (moved to https://link.springer.com/article/10.1007/s00180-015-0621-7)
    From: README.md
    Status: 301
    Message: Moved Permanently
  For content that is 'Moved Permanently', please change http to https,
  add trailing slashes, or replace the old by the new URL.

Found the following URLs which should use \doi (with the DOI name only):
  File 'BaFe2As2.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
  File 'Fitters.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
  File 'GGeDS.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
  File 'GeDS-package.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
  File 'NGeDS.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
  File 'SplineReg.Rd':
    https://doi.org/10.1007/s00180-015-0621-7
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'GeDS' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 12.3.0'
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking whether startup messages can be suppressed ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
format:
  function(x, ...)
format.perc:
  function(probs, digits)
See section 'Registering S3 methods' in the 'Writing R Extensions'
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [14s] NOTE
Found if() conditions comparing class() to string:
File 'GeDS/R/IntegrateDerive.R': if (class(object) != "GeDS") ...
File 'GeDS/R/IntegrateDerive.R': if (class(object) != "GeDS") ...
File 'GeDS/R/pprep.R': if (class(object) != "GeDS") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... NOTE
checkRd: (-1) EWmortality.Rd:10: Lost braces
    10 |   {\code{Exposure} is a mid-year estimate of the population exposed to risk.}}
       |   ^
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking examples ... OK
* checking PDF version of manual ... [19s] OK
* checking HTML version of manual ... OK
* DONE
Status: 4 NOTEs