* using log directory ‘/srv/hornik/tmp/CRAN/GWSDAT.Rcheck’
* using R Under development (unstable) (2023-10-31 r85451)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 16.0.6 (15)
    GNU Fortran (Debian 13.2.0-4) 13.2.0
* running under: Debian GNU/Linux trixie/sid
* using session charset: UTF-8
* checking for file ‘GWSDAT/DESCRIPTION’ ... OK
* this is package ‘GWSDAT’ version ‘3.2.0’
* package encoding: UTF-8
* checking CRAN incoming feasibility ... [3s/3s] Note_to_CRAN_maintainers
Maintainer: ‘Wayne Jones <wayne.w.jones@shell.com>’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘GWSDAT’ can be installed ... [20s/20s] OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... NOTE
Problems with news in ‘NEWS.md’:
No news entries found.
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [6s/6s] OK
* checking whether the package can be loaded with stated dependencies ... [5s/5s] OK
* checking whether the package can be unloaded cleanly ... [5s/5s] OK
* checking whether the namespace can be loaded with stated dependencies ... [6s/6s] OK
* checking whether the namespace can be unloaded cleanly ... [6s/6s] OK
* checking loading without being on the library search path ... [6s/6s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... NOTE
Mismatches for apparent methods not registered:
predict:
  function(object, ...)
predict.GWSDAT.PSpline:
  function(mod, newdata, se)
See section ‘Registering S3 methods’ in the ‘Writing R Extensions’
manual.
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [33s/33s] NOTE
Found an obsolete/platform-specific call in the following function:
  ‘server’
Found the platform-specific device:
  ‘win.metafile’
dev.new() is the preferred way to open a new device, in the unlikely
event one is needed.
Found if() conditions comparing class() to string:
File ‘GWSDAT/R/plotSpatialImage.R’: if (is.null(timepoint) || class(timepoint) != "Date") ...
File ‘GWSDAT/R/plotTrendTable.R’: if (is.null(timepoint) || class(timepoint) != "Date") ...
File ‘GWSDAT/R/processData.R’: if (class(solute_data$SampleDate) == "integer") ...
File ‘GWSDAT/R/readData.R’: if (class(ret) != "data.frame") ...
File ‘GWSDAT/R/readData.R’: if (class(well_data) != "data.frame") ...
File ‘GWSDAT/R/readData.R’: if (class(DF$SampleDate) == "numeric" | class(DF$SampleDate) == "integer") ...
File ‘GWSDAT/R/server.R’: if (class(pr_dat) == "dialogBox") ...
File ‘GWSDAT/R/server.R’: if (class(csite_tmp) != "GWSDAT_DATA_LIST") ...
File ‘GWSDAT/R/server.R’: if (class(ret) == "dialogBox") ...
File ‘GWSDAT/R/server.R’: if (class(ret) == "dialogBox") ...
File ‘GWSDAT/R/server.R’: if (class(pr_dat) == "dialogBox") ...
File ‘GWSDAT/R/server.R’: if (class(ret) == "Aq_list") ...
File ‘GWSDAT/R/server.R’: if (class(ret) == "dialogBox") ...
Use inherits() (or maybe is()) instead.
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [6s/6s] OK
* checking PDF version of manual ... [3s/3s] OK
* checking HTML version of manual ... [0s/0s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 3 NOTEs