downloading reverse dependencies ‘autotesteR’, ‘colleyRstats’, ‘EasyDescribe’, ‘factorH’, ‘mbX’, ‘omu’, ‘trendtestR’, ‘voiceR’, ‘eq5d’, ‘FSAdata’, ‘OlinkAnalyze’, ‘RFishBC’, ‘RVAideMemoire’ trying URL 'file:///data/Repositories/CRAN/src/contrib/autotesteR_0.1.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/colleyRstats_0.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/EasyDescribe_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/factorH_0.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/mbX_0.2.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/omu_1.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/trendtestR_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/voiceR_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/eq5d_0.16.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/FSAdata_0.4.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/OlinkAnalyze_4.4.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RFishBC_0.2.7.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/RVAideMemoire_0.9-83-12.tar.gz' installing dependencies ‘ARTool’, ‘CATT’, ‘dgof’, ‘EMT’, ‘fishmethods’, ‘FSA’, ‘FSAdata’, ‘ggiraphExtra’, ‘ggstatsplot’, ‘moocore’, ‘multiCA’, ‘mvnormtest’, ‘nparLD’, ‘phia’, ‘rcompanion’, ‘report’, ‘reporttools’, ‘RGCCA’, ‘sjPlot’, ‘soundgen’ also installing the dependencies ‘ggside’, ‘statsExpressions’, ‘sjstats’, ‘phonTools’, ‘mycor’ begin installing package ‘ggside’ begin installing package ‘sjstats’ begin installing package ‘statsExpressions’ begin installing package ‘phonTools’ begin installing package ‘mycor’ begin installing package ‘fishmethods’ begin installing package ‘ARTool’ begin installing package ‘FSAdata’ begin installing package ‘report’ begin installing package ‘moocore’ begin installing package ‘reporttools’ begin installing package ‘nparLD’ begin installing package ‘CATT’ begin installing package ‘multiCA’ begin installing package ‘rcompanion’ begin installing package ‘phia’ begin installing package ‘dgof’ begin installing package ‘EMT’ begin installing package ‘mvnormtest’ begin installing package ‘RGCCA’ begin installing package ‘FSA’ * installing *source* package ‘mvnormtest’ ... ** this is package ‘mvnormtest’ version ‘0.1-9-3’ ** package ‘mvnormtest’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mvnormtest) * installing *source* package ‘CATT’ ... ** this is package ‘CATT’ version ‘2.0’ ** package ‘CATT’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CATT) * installing *source* package ‘mycor’ ... ** this is package ‘mycor’ version ‘0.1.1’ ** package ‘mycor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mycor) begin installing package ‘ggiraphExtra’ * installing *source* package ‘EMT’ ... ** this is package ‘EMT’ version ‘1.3.2’ ** package ‘EMT’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (EMT) * installing *source* package ‘dgof’ ... ** this is package ‘dgof’ version ‘1.5.1’ ** package ‘dgof’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpJaHkDb/R.INSTALL30784436aaefd1/dgof/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ks.c -o ks.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o dgof.so init.o ks.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpJaHkDb/R.INSTALL30784436aaefd1/dgof/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-dgof/00new/dgof/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (dgof) * installing *source* package ‘FSAdata’ ... ** this is package ‘FSAdata’ version ‘0.4.1’ ** package ‘FSAdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FSAdata) * installing *source* package ‘reporttools’ ... ** this is package ‘reporttools’ version ‘1.1.4’ ** package ‘reporttools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reporttools) * installing *source* package ‘sjstats’ ... ** this is package ‘sjstats’ version ‘0.19.1’ ** package ‘sjstats’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sjstats) begin installing package ‘sjPlot’ * installing *source* package ‘phonTools’ ... ** this is package ‘phonTools’ version ‘0.2-2.2’ ** package ‘phonTools’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phonTools) begin installing package ‘soundgen’ * installing *source* package ‘statsExpressions’ ... ** this is package ‘statsExpressions’ version ‘1.7.2’ ** package ‘statsExpressions’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (statsExpressions) * installing *source* package ‘multiCA’ ... ** this is package ‘multiCA’ version ‘1.2.0’ ** package ‘multiCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (multiCA) * installing *source* package ‘phia’ ... ** this is package ‘phia’ version ‘0.3-2’ ** package ‘phia’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (phia) * installing *source* package ‘nparLD’ ... ** this is package ‘nparLD’ version ‘2.2’ ** package ‘nparLD’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nparLD) * installing *source* package ‘ARTool’ ... ** this is package ‘ARTool’ version ‘0.11.2’ ** package ‘ARTool’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ARTool) * installing *source* package ‘report’ ... ** this is package ‘report’ version ‘0.6.3’ ** package ‘report’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (report) * installing *source* package ‘ggside’ ... ** this is package ‘ggside’ version ‘0.4.1’ ** package ‘ggside’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggside) begin installing package ‘ggstatsplot’ * installing *source* package ‘FSA’ ... ** this is package ‘FSA’ version ‘0.10.1’ ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (FSA) * installing *source* package ‘ggiraphExtra’ ... ** this is package ‘ggiraphExtra’ version ‘0.3.0’ ** package ‘ggiraphExtra’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggiraphExtra) * installing *source* package ‘rcompanion’ ... ** this is package ‘rcompanion’ version ‘2.5.1’ ** package ‘rcompanion’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rcompanion) * installing *source* package ‘sjPlot’ ... ** this is package ‘sjPlot’ version ‘2.9.0’ ** package ‘sjPlot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sjPlot) * installing *source* package ‘RGCCA’ ... ** this is package ‘RGCCA’ version ‘3.0.3’ ** package ‘RGCCA’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RGCCA) * installing *source* package ‘ggstatsplot’ ... ** this is package ‘ggstatsplot’ version ‘0.13.4’ ** package ‘ggstatsplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (ggstatsplot) * installing *source* package ‘moocore’ ... ** this is package ‘moocore’ version ‘0.1.10’ ** package ‘moocore’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hv3dplus.c -o libmoocore/hv3dplus.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hv4d.c -o libmoocore/hv4d.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hv_contrib.c -o libmoocore/hv_contrib.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hv.c -o libmoocore/hv.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hvapprox.c -o libmoocore/hvapprox.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/hvc3d.c -o libmoocore/hvc3d.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/pareto.c -o libmoocore/pareto.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/whv.c -o libmoocore/whv.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/whv_hype.c -o libmoocore/whv_hype.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/avl.c -o libmoocore/avl.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/eaf3d.c -o libmoocore/eaf3d.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/eaf.c -o libmoocore/eaf.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/io.c -o libmoocore/io.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/rng.c -o libmoocore/rng.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c libmoocore/mt19937/mt19937.c -o libmoocore/mt19937/mt19937.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -DR_PACKAGE -DDEBUG=0 -I./libmoocore/ -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rmoocore.c -o Rmoocore.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o moocore.so libmoocore/hv3dplus.o libmoocore/hv4d.o libmoocore/hv_contrib.o libmoocore/hv.o libmoocore/hvapprox.o libmoocore/hvc3d.o libmoocore/pareto.o libmoocore/whv.o libmoocore/whv_hype.o libmoocore/avl.o libmoocore/eaf3d.o libmoocore/eaf.o libmoocore/io.o libmoocore/rng.o libmoocore/mt19937/mt19937.o init.o Rmoocore.o -L/home/hornik/tmp/R/lib -lR make -C libmoocore all march=none CC="gcc-15" CFLAGS="-g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native " WARN_CFLAGS="" OPT_CFLAGS="" DEBUG=0 EXE= BINDIR=/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/libmoocore' Building on 'Linux' ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/eaf <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/nondominated <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hv <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hvapprox <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/igd <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/epsilon <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/dominatedsets <--- ---> Removing /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/ndsort <--- ---> Removing object files: avl.o cmdline.o dominatedsets.o eaf3d.o eaf.o eafdiff.o eaf_main.o epsilon.o hv3dplus.o hv4d.o hv.o hvapprox.o hvc3d.o hv_contrib.o igd.o io.o libutil.o main-hv.o main-hvapprox.o mt19937/mt19937.o ndsort.o nondominated.o pareto.o rng.o timer.o whv.o whv_hype.o <--- make default make[3]: Entering directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/libmoocore' Building on 'Linux' gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o cmdline.o cmdline.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o io.o io.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o eaf.o eaf.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o eaf_main.o eaf_main.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o eaf3d.o eaf3d.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o avl.o avl.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/eaf version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/eaf cmdline.o io.o eaf.o eaf_main.o eaf3d.o avl.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o nondominated.o nondominated.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o timer.o timer.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/nondominated version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/nondominated cmdline.o io.o nondominated.o timer.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o main-hv.o main-hv.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hv.o hv.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hv3dplus.o hv3dplus.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hv4d.o hv4d.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hvc3d.o hvc3d.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hv_contrib.o hv_contrib.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hv version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hv cmdline.o io.o main-hv.o timer.o hv.o hv3dplus.o hv4d.o hvc3d.o hv_contrib.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o main-hvapprox.o main-hvapprox.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o hvapprox.o hvapprox.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o rng.o rng.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o mt19937/mt19937.o mt19937/mt19937.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hvapprox version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/hvapprox cmdline.o io.o main-hvapprox.o timer.o hvapprox.o rng.o mt19937/mt19937.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o igd.o igd.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/igd version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/igd cmdline.o io.o igd.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o epsilon.o epsilon.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/epsilon version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/epsilon cmdline.o io.o epsilon.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o dominatedsets.o dominatedsets.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/dominatedsets version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/dominatedsets cmdline.o io.o dominatedsets.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o ndsort.o ndsort.c gcc-15 -D_GNU_SOURCE -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c -o pareto.o pareto.c --> Building /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/ndsort version 0.17.0 <--- gcc-15 -o /home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/ndsort cmdline.o io.o ndsort.o pareto.o hv.o hv3dplus.o hv4d.o hvc3d.o hv_contrib.o -DDEBUG=0 -DVERSION='"0.17.0"' -DMARCH='""' -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -lm make[3]: Leaving directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/libmoocore' make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src/libmoocore' make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpLrSLpf/R.INSTALL3078321a69d3da/moocore/src' installing via 'install.libs.R' to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-moocore/00new/moocore ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (moocore) * installing *source* package ‘soundgen’ ... ** this is package ‘soundgen’ version ‘2.8.0’ ** package ‘soundgen’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (soundgen) * installing *source* package ‘fishmethods’ ... ** this is package ‘fishmethods’ version ‘1.13-1’ ** package ‘fishmethods’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpZm6Axc/R.INSTALL30782132f8c0aa/fishmethods/src' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c init_dummy_file.cpp -o init_dummy_file.o (cd TMB; /home/hornik/tmp/R/bin/Rscript \ --no-save --no-restore compile.R '') Note: Using Makevars in /home/hornik/.R/Makevars-gcc using C++ compiler: ‘g++-15 (Debian 15.2.0-12) 15.2.0’ make[2]: Entering directory '/home/hornik/tmp/scratch/RtmpZm6Axc/R.INSTALL30782132f8c0aa/fishmethods/src/TMB' g++-15 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include" -I"/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include" -DTMB_EIGEN_DISABLE_WARNINGS -DTMB_LIB_INIT=R_init_fishmethods_TMBExports -DCPPAD_FRAMEWORK -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c fishmethods_TMBExports.cpp -o fishmethods_TMBExports.o g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fishmethods_TMBExports.so fishmethods_TMBExports.o -L/home/hornik/tmp/R/lib -lR make[2]: Leaving directory '/home/hornik/tmp/scratch/RtmpZm6Axc/R.INSTALL30782132f8c0aa/fishmethods/src/TMB' [1] TRUE g++-15 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o fishmethods.so init_dummy_file.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpZm6Axc/R.INSTALL30782132f8c0aa/fishmethods/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-fishmethods/00new/fishmethods/libs ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (fishmethods) checking FSA_0.10.1.tar.gz ... checking autotesteR_0.1.7.tar.gz ... checking colleyRstats_0.0.2.tar.gz ... checking EasyDescribe_0.1.2.tar.gz ... checking factorH_0.5.0.tar.gz ... checking mbX_0.2.0.tar.gz ... checking omu_1.1.2.tar.gz ... checking trendtestR_1.0.1.tar.gz ... checking voiceR_0.1.0.tar.gz ... checking eq5d_0.16.1.tar.gz ... checking FSAdata_0.4.1.tar.gz ... checking OlinkAnalyze_4.4.0.tar.gz ... checking RFishBC_0.2.7.tar.gz ... checking RVAideMemoire_0.9-83-12.tar.gz ... Depends: Package: FSA Depends: R (>= 3.5.0) Imports: graphics, grDevices, stats, tools, utils, car, dunn.test, FlexParamCurve, lmtest, plotrix, purrr, withr Timings: user system elapsed FSA 111.392 5.202 118.845 Results: Check status summary: OK Source packages 1 Reverse depends 13 Check results summary: FSA ... OK rdepends_autotesteR ... OK rdepends_colleyRstats ... OK rdepends_EasyDescribe ... OK rdepends_eq5d ... OK rdepends_factorH ... OK rdepends_FSAdata ... OK rdepends_mbX ... OK rdepends_OlinkAnalyze ... OK rdepends_omu ... OK rdepends_RFishBC ... OK rdepends_RVAideMemoire ... OK rdepends_trendtestR ... OK rdepends_voiceR ... OK