* using log directory 'd:/RCompile/CRANincoming/R-devel/FAIRmaterials.Rcheck' * using R Under development (unstable) (2024-06-20 r86796 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'FAIRmaterials/DESCRIPTION' ... OK * this is package 'FAIRmaterials' version '0.4.2' * package encoding: UTF-8 * checking CRAN incoming feasibility ... [15s] NOTE Maintainer: 'Roger H French ' New maintainer: Roger H French Old maintainer(s): Roger French Possibly misspelled words in DESCRIPTION: CSV (358:33) CSVs (361:75) EE (368:52, 368:69) EERE (367:55) FAIRification (2:33) JSON (359:68) LD (359:73) RDF (359:15, 359:34) README (362:71) SETO (368:26) SVG (361:60) ontologies (365:13, 365:49) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'FAIRmaterials' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... [13s] OK Running 'testthat.R' [12s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... ERROR Error(s) in re-building vignettes: --- re-building 'FAIRmaterials.Rmd' using rmarkdown Warning: The 'python' engine in knitr requires the reticulate package. If you do not want to use the reticulate package, set the chunk option python.reticulate = FALSE. Quitting from lines 92-93 [unnamed-chunk-7] (FAIRmaterials.Rmd) Error: processing vignette 'FAIRmaterials.Rmd' failed with diagnostics: there is no package called 'reticulate' --- failed re-building 'FAIRmaterials.Rmd' SUMMARY: processing the following file failed: 'FAIRmaterials.Rmd' Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [15s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 NOTE