context('confounder.trans - transform confounders ready to be used by PLSIM') test_that('Output of confounder.trans', { dat.cov <- data.frame( age = c(1.5, 2.3, 3.1, 4.8, 5.2), sex = c(1, 2, 1, 2, 2), race = c(1, 2, 3, 4, 5) ) dat.cov$sex <- factor(dat.cov$sex, 1:2, c('Male', 'Female')) dat.cov$race <- factor(dat.cov$race,1:5,c("NH-White", "NH-Black", "MexicanAmerican", "OtherRace", "Hispanic")) Z_continuous = c("age") Z_discrete = c("sex", "race") cov_m <- confounder.trans(Z_continuous = c("age"), Z_discrete = c("sex", "race"), data = dat.cov) expect_true(is.list(cov_m)) expect_true(is.vector(cov_m$New.Name)) expect_true(is.data.frame(cov_m$Updated.data)) expect_equal(ncol(cov_m$Updated.data), ncol(dat.cov) + length(cov_m$New.Name)) })