* using log directory ‘/srv/hornik/tmp/CRAN_pretest/EMC2.Rcheck’ * using R Under development (unstable) (2024-08-28 r87070) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘EMC2/DESCRIPTION’ ... OK * this is package ‘EMC2’ version ‘2.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/5s] NOTE Maintainer: ‘Niek Stevenson ’ New submission Possibly misspelled words in DESCRIPTION: DDM (13:80) LBA (14:41) LNR (15:17) RDM (14:71) al (24:30) et (24:27) Found the following (possibly) invalid URLs: URL: https://github.com/ampl-psych/EMC2/archive/refs/heads/main.tar.gz From: README.md Status: 404 Message: Not Found URL: https://www.pnas.org/content/105/45/17538 (moved to https://www.pnas.org/doi/10.1073/pnas.0805903105) From: man/forstmann.Rd man/samples_LNR.Rd Status: 301 Message: Moved Permanently For content that is 'Moved Permanently', please change http to https, add trailing slashes, or replace the old by the new URL. * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘EMC2’ can be installed ... [17s/17s] OK * used C++ compiler: ‘Debian clang version 18.1.8 (9)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [21s/21s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [1s/1s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking examples ... [28s/28s] NOTE Examples with CPU (user + system) or elapsed time > 5s user system elapsed plot_prior 6.401 0.035 6.438 profile_plot 5.713 0.007 5.721 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [50s/35s] OK Running ‘testthat.R’ [50s/35s] * checking PDF version of manual ... [4s/4s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs