* using log directory ‘/srv/hornik/tmp/CRAN_pretest/Distance.Rcheck’ * using R Under development (unstable) (2025-07-04 r88383) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3) Debian flang-new version 19.1.7 (3) * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘Distance/DESCRIPTION’ ... OK * this is package ‘Distance’ version ‘2.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘Distance’ can be installed ... [6s/6s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [9s/9s] OK * checking Rd files ... [1s/1s] WARNING prepare_Rd: Couldn't find file REFERENCES.bib in package `mrds' prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': innes2002 prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': buckland2001 prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': borchers1998 prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': fewster2009 prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': buckland2001 prepare_Rd: possibly non-existing or duplicated key(s) in bib file from package 'mrds': innes2002 * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [3s/3s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [44s/44s] ERROR Running ‘testthat.R’ [44s/44s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(Distance) Loading required package: mrds This is mrds 3.0.0 Built: R 4.6.0; ; 2025-07-05 02:37:04 UTC; unix Attaching package: 'Distance' The following object is masked from 'package:mrds': create.bins > > test_check("Distance") [ FAIL 2 | WARN 0 | SKIP 32 | PASS 178 ] ══ Skipped tests (32) ══════════════════════════════════════════════════════════ • On CRAN (28): 'test_adjustments.R:16:3', 'test_adjustments.R:54:3', 'test_adjustments.R:93:3', 'test_binned.R:16:3', 'test_bootdht.R:5:3', 'test_bootdht.R:114:3', 'test_bootdht.R:169:3', 'test_cuecounts.R:25:3', 'test_cuecounts.R:86:3', 'test_dht.R:14:3', 'test_dht.R:40:3', 'test_ds.R:81:3', 'test_ds.R:147:3', 'test_ds.R:173:3', 'test_ds.R:203:3', 'test_ds.R:226:3', 'test_ds.R:261:3', 'test_minke.R:56:3', 'test_minke.R:95:3', 'test_minke.R:130:3', 'test_minke.R:173:3', 'test_minke.R:246:3', 'test_minke.R:266:3', 'test_minke.R:306:3', 'test_replicate.R:6:3', 'test_summarize.R:14:3', 'test_summarize.R:43:3', 'test_summarize.R:72:3' • empty test (4): 'test_dht2.R:237:1', 'test_ptexercise.R:10:1', 'test_ptexercise.R:51:1', 'test_ptexercise.R:58:1' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Failure ('test_golftees.R:54:3'): ER variance ─────────────────────────────── `df <- ds(gtees, truncation = trunc, key = "hn", adjustment = NULL)` did not produce any warnings. ── Failure ('test_golftees.R:84:3'): Same results as Distance ────────────────── `... <- NULL` did not produce any warnings. [ FAIL 2 | WARN 0 | SKIP 32 | PASS 178 ] Error: Test failures Execution halted * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [1s/1s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING