downloading reverse dependencies ... downloading apollo_0.3.5.tar.gz ... ok downloading cccrm_3.0.5.tar.gz ... ok downloading ctsem_3.10.2.tar.gz ... ok downloading ctsmTMB_1.0.0.tar.gz ... ok downloading curesurv_0.1.2.tar.gz ... ok downloading doBy_4.6.27.tar.gz ... ok downloading fitode_0.1.1.tar.gz ... ok downloading iccCounts_1.1.2.tar.gz ... ok downloading irtpwr_1.0.3.tar.gz ... ok downloading mirt_1.44.0.tar.gz ... ok downloading mosaicCalc_0.6.4.tar.gz ... ok downloading neuralnet_1.44.2.tar.gz ... ok downloading nlstac_0.2.0.tar.gz ... ok downloading ordinalCont_2.0.2.tar.gz ... ok downloading PFIM_6.1.tar.gz ... ok downloading postcard_1.0.0.tar.gz ... ok downloading regmedint_1.0.1.tar.gz ... ok downloading resde_1.1.tar.gz ... ok downloading RGCCA_3.0.3.tar.gz ... ok downloading rsq_2.7.tar.gz ... ok downloading Sim.DiffProc_4.9.tar.gz ... ok downloading THREC_1.0.0.tar.gz ... ok downloading xgxr_1.1.2.tar.gz ... ok downloading docopulae_0.4.0.tar.gz ... ok downloading interp_1.1-6.tar.gz ... ok downloading nlsr_2023.8.31.tar.gz ... ok downloading stokes_1.2-3.tar.gz ... ok installing dependencies ‘bgw’, ‘calculus’, ‘cOde’, ‘deming’, ‘Deriv’, ‘gggrid’, ‘mcr’, ‘mirtCAT’, ‘mize’, ‘nlmeU’, ‘nlraa’, ‘options’, ‘papaja’, ‘permutations’, ‘plink’, ‘quadform’, ‘RcppZiggurat’, ‘RSGHB’, ‘Rsolnp’, ‘RTMB’, ‘RTMBode’, ‘SparseGrid’, ‘spray’, ‘survexp.fr’, ‘xhaz’ Warning: package ‘RTMBode’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘tinylabels’, ‘rmdfiltr’, ‘mexhaz’, ‘robslopes’ begin installing package ‘tinylabels’ begin installing package ‘rmdfiltr’ begin installing package ‘mexhaz’ begin installing package ‘robslopes’ begin installing package ‘RSGHB’ begin installing package ‘bgw’ begin installing package ‘nlmeU’ begin installing package ‘cOde’ begin installing package ‘mize’ begin installing package ‘RTMB’ begin installing package ‘RcppZiggurat’ begin installing package ‘survexp.fr’ begin installing package ‘plink’ begin installing package ‘Deriv’ begin installing package ‘calculus’ begin installing package ‘options’ begin installing package ‘gggrid’ begin installing package ‘deming’ begin installing package ‘SparseGrid’ begin installing package ‘nlraa’ begin installing package ‘permutations’ begin installing package ‘spray’ begin installing package ‘quadform’ begin installing package ‘Rsolnp’ * installing *source* package ‘rmdfiltr’ ... ** this is package ‘rmdfiltr’ version ‘0.1.5’ ** package ‘rmdfiltr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rmdfiltr) * installing *source* package ‘quadform’ ... ** this is package ‘quadform’ version ‘0.0-2’ ** package ‘quadform’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (quadform) * installing *source* package ‘SparseGrid’ ... ** this is package ‘SparseGrid’ version ‘0.8.2’ ** package ‘SparseGrid’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (SparseGrid) * installing *source* package ‘deming’ ... ** this is package ‘deming’ version ‘1.4-1’ ** package ‘deming’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (deming) * installing *source* package ‘tinylabels’ ... ** this is package ‘tinylabels’ version ‘0.2.5’ ** package ‘tinylabels’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tinylabels) begin installing package ‘papaja’ * installing *source* package ‘cOde’ ... ** this is package ‘cOde’ version ‘1.1.1’ ** package ‘cOde’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cOde) * installing *source* package ‘nlmeU’ ... ** this is package ‘nlmeU’ version ‘0.70-9’ ** package ‘nlmeU’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlmeU) * installing *source* package ‘options’ ... ** this is package ‘options’ version ‘0.3.1’ ** package ‘options’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (options) * installing *source* package ‘Deriv’ ... ** this is package ‘Deriv’ version ‘4.2.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Deriv) begin installing package ‘mirtCAT’ * installing *source* package ‘gggrid’ ... ** this is package ‘gggrid’ version ‘0.2-0’ ** package ‘gggrid’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (gggrid) * installing *source* package ‘survexp.fr’ ... ** this is package ‘survexp.fr’ version ‘1.2’ ** package ‘survexp.fr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (survexp.fr) * installing *source* package ‘bgw’ ... ** this is package ‘bgw’ version ‘0.1.3’ ** package ‘bgw’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpk1sIyI/R.INSTALL17182932f254d6/bgw/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bgw_c_progs.c -o bgw_c_progs.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dgletc_bgw_no_write.f90 -o dgletc_bgw_no_write.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dglfg_bgw.f90 -o dglfg_bgw.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c dmdc.f90 -o dmdc.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c drglg_c_entry.f90 -o drglg_c_entry.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o bgw.so bgw_c_progs.o dgletc_bgw_no_write.o dglfg_bgw.o dmdc.o drglg_c_entry.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpk1sIyI/R.INSTALL17182932f254d6/bgw/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-bgw/00new/bgw/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bgw) * installing *source* package ‘mize’ ... ** this is package ‘mize’ version ‘0.2.4’ ** package ‘mize’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mize) * installing *source* package ‘RSGHB’ ... ** this is package ‘RSGHB’ version ‘1.2.2’ ** package ‘RSGHB’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpepfE4T/R.INSTALL17184a56c52b43/RSGHB/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RSGHB.c -o RSGHB.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c RSGHB_init.c -o RSGHB_init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RSGHB.so RSGHB.o RSGHB_init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpepfE4T/R.INSTALL17184a56c52b43/RSGHB/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RSGHB/00new/RSGHB/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RSGHB) * installing *source* package ‘permutations’ ... ** this is package ‘permutations’ version ‘1.1-6’ ** package ‘permutations’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (permutations) * installing *source* package ‘papaja’ ... ** this is package ‘papaja’ version ‘0.1.3’ ** package ‘papaja’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (papaja) * installing *source* package ‘RcppZiggurat’ ... ** this is package ‘RcppZiggurat’ version ‘0.1.8’ ** package ‘RcppZiggurat’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWi4ati/R.INSTALL17184e59199fe7/RcppZiggurat/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I. -I../inst/include -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppGSL/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c ziggurat.cpp -o ziggurat.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RcppZiggurat.so RcppExports.o ziggurat.o -L/usr/lib/x86_64-linux-gnu -lgsl -lgslcblas -lm -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWi4ati/R.INSTALL17184e59199fe7/RcppZiggurat/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RcppZiggurat/00new/RcppZiggurat/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RcppZiggurat) * installing *source* package ‘nlraa’ ... ** this is package ‘nlraa’ version ‘1.9.7’ ** package ‘nlraa’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (nlraa) * installing *source* package ‘calculus’ ... ** this is package ‘calculus’ version ‘1.1.0’ ** package ‘calculus’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpsQ2PZY/R.INSTALL1718551512282a/calculus/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c calculus.cpp -o calculus.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o calculus.so RcppExports.o calculus.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpsQ2PZY/R.INSTALL1718551512282a/calculus/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-calculus/00new/calculus/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (calculus) * installing *source* package ‘spray’ ... ** this is package ‘spray’ version ‘1.0-27’ ** package ‘spray’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmppO8qN4/R.INSTALL171868ba97e3/spray/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c spray_init.c -o spray_init.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c spray_ops.cpp -o spray_ops.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o spray.so RcppExports.o spray_init.o spray_ops.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmppO8qN4/R.INSTALL171868ba97e3/spray/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-spray/00new/spray/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (spray) * installing *source* package ‘mexhaz’ ... ** this is package ‘mexhaz’ version ‘2.6’ ** package ‘mexhaz’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpqWP9my/R.INSTALL17182e3480e1c8/mexhaz/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DeltaBs0R.c -o DeltaBs0R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DeltaBs1R.c -o DeltaBs1R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DeltaBs23R.c -o DeltaBs23R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DeltaNsR.c -o DeltaNsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DeltaWeibR.c -o DeltaWeibR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c FrailtyAdapt.c -o FrailtyAdapt.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c FrailtyAdaptL.c -o FrailtyAdaptL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GaussProcLIN.c -o GaussProcLIN.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GaussProcNPH.c -o GaussProcNPH.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_BsL.c -o HGHAggr_BsL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_BsLx.c -o HGHAggr_BsLx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_BsR.c -o HGHAggr_BsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_BsRx.c -o HGHAggr_BsRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_NsL.c -o HGHAggr_NsL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_NsLx.c -o HGHAggr_NsLx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_NsR.c -o HGHAggr_NsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_NsRx.c -o HGHAggr_NsRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_Pois.c -o HGHAggr_Pois.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_PwL.c -o HGHAggr_PwL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_PwLx.c -o HGHAggr_PwLx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_PwR.c -o HGHAggr_PwR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_PwRx.c -o HGHAggr_PwRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_WbL.c -o HGHAggr_WbL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_WbLx.c -o HGHAggr_WbLx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_WbR.c -o HGHAggr_WbR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGHAggr_WbRx.c -o HGHAggr_WbRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_BsR.c -o HGH_BsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_BsRx.c -o HGH_BsRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_NsR.c -o HGH_NsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_NsRx.c -o HGH_NsRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_PwR.c -o HGH_PwR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_PwRx.c -o HGH_PwRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_WbR.c -o HGH_WbR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HGH_WbRx.c -o HGH_WbRx.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs0C.c -o HazardBs0C.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs0L.c -o HazardBs0L.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs0R.c -o HazardBs0R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs1C.c -o HazardBs1C.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs1L.c -o HazardBs1L.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs1R.c -o HazardBs1R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs23C.c -o HazardBs23C.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs23L.c -o HazardBs23L.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardBs23R.c -o HazardBs23R.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardNsC.c -o HazardNsC.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardNsL.c -o HazardNsL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardNsR.c -o HazardNsR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardWeibC.c -o HazardWeibC.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardWeibL.c -o HazardWeibL.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c HazardWeibR.c -o HazardWeibR.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c OptFunc.c -o OptFunc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c SplineFunc.c -o SplineFunc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o mexhaz.so DeltaBs0R.o DeltaBs1R.o DeltaBs23R.o DeltaNsR.o DeltaWeibR.o FrailtyAdapt.o FrailtyAdaptL.o GaussProcLIN.o GaussProcNPH.o HGHAggr_BsL.o HGHAggr_BsLx.o HGHAggr_BsR.o HGHAggr_BsRx.o HGHAggr_NsL.o HGHAggr_NsLx.o HGHAggr_NsR.o HGHAggr_NsRx.o HGHAggr_Pois.o HGHAggr_PwL.o HGHAggr_PwLx.o HGHAggr_PwR.o HGHAggr_PwRx.o HGHAggr_WbL.o HGHAggr_WbLx.o HGHAggr_WbR.o HGHAggr_WbRx.o HGH_BsR.o HGH_BsRx.o HGH_NsR.o HGH_NsRx.o HGH_PwR.o HGH_PwRx.o HGH_WbR.o HGH_WbRx.o HazardBs0C.o HazardBs0L.o HazardBs0R.o HazardBs1C.o HazardBs1L.o HazardBs1R.o HazardBs23C.o HazardBs23L.o HazardBs23R.o HazardNsC.o HazardNsL.o HazardNsR.o HazardWeibC.o HazardWeibL.o HazardWeibR.o OptFunc.o SplineFunc.o init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpqWP9my/R.INSTALL17182e3480e1c8/mexhaz/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mexhaz/00new/mexhaz/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mexhaz) begin installing package ‘xhaz’ * installing *source* package ‘plink’ ... ** this is package ‘plink’ version ‘1.5-1’ ** package ‘plink’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (plink) * installing *source* package ‘mirtCAT’ ... ** this is package ‘mirtCAT’ version ‘1.14’ ** package ‘mirtCAT’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpk1yvyE/R.INSTALL171b46634cac3f/mirtCAT/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c CAT_functions.cpp -o CAT_functions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c item_functions.cpp -o item_functions.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o mirtCAT.so CAT_functions.o item_functions.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpk1yvyE/R.INSTALL171b46634cac3f/mirtCAT/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mirtCAT/00new/mirtCAT/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mirtCAT) * installing *source* package ‘xhaz’ ... ** this is package ‘xhaz’ version ‘2.0.2’ ** package ‘xhaz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (xhaz) * installing *source* package ‘Rsolnp’ ... ** this is package ‘Rsolnp’ version ‘2.0.0’ ** package ‘Rsolnp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpCuzCyP/R.INSTALL17186c1ea5637b/Rsolnp/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c solnp.cpp -o solnp.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c subnp_state.cpp -o subnp_state.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o Rsolnp.so RcppExports.o solnp.o subnp_state.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpCuzCyP/R.INSTALL17186c1ea5637b/Rsolnp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-Rsolnp/00new/Rsolnp/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Rsolnp) * installing *source* package ‘robslopes’ ... ** this is package ‘robslopes’ version ‘1.1.3’ ** package ‘robslopes’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpwisS6U/R.INSTALL1718254423c21c/robslopes/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c HelpFunctions.cpp -o HelpFunctions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c countIndividualInversions.cpp -o countIndividualInversions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpparma_Passing_Bablok.cpp -o rcpparma_Passing_Bablok.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpparma_Theil_Sen.cpp -o rcpparma_Theil_Sen.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppArmadillo/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -DARMA_64BIT_WORD -fpic -g -O2 -Wall -pedantic -mtune=native -c rcpparma_repeated_median.cpp -o rcpparma_repeated_median.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o robslopes.so HelpFunctions.o RcppExports.o countIndividualInversions.o rcpparma_Passing_Bablok.o rcpparma_Theil_Sen.o rcpparma_repeated_median.o -fopenmp -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpwisS6U/R.INSTALL1718254423c21c/robslopes/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-robslopes/00new/robslopes/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (robslopes) begin installing package ‘mcr’ * installing *source* package ‘mcr’ ... ** this is package ‘mcr’ version ‘1.3.3.1’ ** package ‘mcr’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpMCxvrq/R.INSTALL171f15554710f5/mcr/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c PaBaAlgorithm.c -o PaBaAlgorithm.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c calcRegression.c -o calcRegression.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gfortran-14 -fpic -g -O2 -Wall -pedantic -mtune=native -c ktau.f -o ktau.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c utils.functions.c -o utils.functions.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o mcr.so PaBaAlgorithm.o calcRegression.o init.o ktau.o utils.functions.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpMCxvrq/R.INSTALL171f15554710f5/mcr/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-mcr/00new/mcr/libs ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (mcr) * installing *source* package ‘RTMB’ ... ** this is package ‘RTMB’ version ‘1.7’ ** package ‘RTMB’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpp01BXE/R.INSTALL171841197b591b/RTMB/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RTMB.cpp -o RTMB.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RTMB_tape.cpp -o RTMB_tape.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c TMB.cpp -o TMB.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c distributions.cpp -o distributions.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c interpol.cpp -o interpol.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c lapack.cpp -o lapack.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c math.cpp -o math.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c math_complex.cpp -o math_complex.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c misc.cpp -o misc.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -DTMB_EIGEN_DISABLE_WARNINGS -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/TMB/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/RcppEigen/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c poshess.cpp -o poshess.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o RTMB.so RTMB.o RTMB_tape.o RcppExports.o TMB.o distributions.o interpol.o lapack.o math.o math_complex.o misc.o poshess.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpp01BXE/R.INSTALL171841197b591b/RTMB/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-RTMB/00new/RTMB/libs ** R ** inst ** byte-compile and prepare package for lazy loading Creating a generic function for ‘fft’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘colSums’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘rowSums’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘diag’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘dexp’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dweibull’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dbinom’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dbeta’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘df’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dlogis’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dt’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dnbinom’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dpois’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dgamma’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘pnorm’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘pgamma’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘ppois’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘pexp’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘pweibull’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘pbeta’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qnorm’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qgamma’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qexp’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qweibull’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qbeta’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘besselK’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘besselI’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘besselJ’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘besselY’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘eigen’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘svd’ from ‘base’ in package ‘RTMB’ (from the saved implicit definition) Creating a generic function for ‘svd’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘cov2cor’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dnorm’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dlnorm’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘plogis’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘qlogis’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘matrix’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘apply’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘sapply’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘ifelse’ from package ‘base’ in package ‘RTMB’ Creating a generic function for ‘pbinom’ from package ‘stats’ in package ‘RTMB’ Creating a generic function for ‘dmultinom’ from package ‘stats’ in package ‘RTMB’ ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (RTMB) checking Deriv_4.2.0.tar.gz ... checking cccrm_3.0.5.tar.gz ... checking apollo_0.3.5.tar.gz ... checking ctsem_3.10.2.tar.gz ... checking ctsmTMB_1.0.0.tar.gz ... checking doBy_4.6.27.tar.gz ... checking curesurv_0.1.2.tar.gz ... checking fitode_0.1.1.tar.gz ... checking iccCounts_1.1.2.tar.gz ... checking mirt_1.44.0.tar.gz ... checking irtpwr_1.0.3.tar.gz ... checking mosaicCalc_0.6.4.tar.gz ... checking neuralnet_1.44.2.tar.gz ... checking nlstac_0.2.0.tar.gz ... checking ordinalCont_2.0.2.tar.gz ... checking PFIM_6.1.tar.gz ... checking postcard_1.0.0.tar.gz ... checking regmedint_1.0.1.tar.gz ... checking resde_1.1.tar.gz ... checking RGCCA_3.0.3.tar.gz ... checking rsq_2.7.tar.gz ... checking Sim.DiffProc_4.9.tar.gz ... checking THREC_1.0.0.tar.gz ... checking xgxr_1.1.2.tar.gz ... checking docopulae_0.4.0.tar.gz ... checking interp_1.1-6.tar.gz ... checking nlsr_2023.8.31.tar.gz ... checking stokes_1.2-3.tar.gz ... Depends: Package: Deriv Imports: methods Timings: user system elapsed Deriv 38.704 3.774 44.787 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 4 23 Check results summary: Deriv ... OK rdepends_apollo ... NOTE * checking R code for possible problems ... [60s/60s] NOTE rdepends_cccrm ... OK rdepends_ctsem ... OK rdepends_ctsmTMB ... OK rdepends_curesurv ... OK rdepends_doBy ... OK rdepends_docopulae ... OK rdepends_fitode ... NOTE * checking Rd cross-references ... NOTE rdepends_iccCounts ... OK rdepends_interp ... OK rdepends_irtpwr ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_mirt ... OK rdepends_mosaicCalc ... OK rdepends_neuralnet ... OK rdepends_nlsr ... OK rdepends_nlstac ... OK rdepends_ordinalCont ... OK rdepends_PFIM ... OK rdepends_postcard ... OK rdepends_regmedint ... OK rdepends_resde ... OK rdepends_RGCCA ... OK rdepends_rsq ... OK rdepends_Sim.DiffProc ... NOTE * checking compiled code ... NOTE rdepends_stokes ... OK rdepends_THREC ... OK rdepends_xgxr ... OK Check results changes: Package: docopulae Check: CRAN incoming feasibility Old result: NOTE Package: iccCounts Check: CRAN incoming feasibility Old result: NOTE Package: mosaicCalc Check: CRAN incoming feasibility Old result: NOTE Package: nlstac Check: CRAN incoming feasibility Old result: NOTE