downloading reverse dependencies ‘bartMan’, ‘bullseye’, ‘condvis2’, ‘corrViz’, ‘vivid’, ‘condvis’, ‘dendextend’, ‘idendr0’, ‘seriation’ trying URL 'file:///data/Repositories/CRAN/src/contrib/bartMan_0.2.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/bullseye_1.0.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/condvis2_0.1.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/corrViz_0.1.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/vivid_0.3.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/condvis_0.5-1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/dendextend_1.19.1.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/idendr0_1.5.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/seriation_1.5.8.tar.gz' installing dependencies ‘acepack’, ‘condvis2’, ‘DendSer’, ‘flashlight’, ‘glmnetUtils’, ‘HSAUR2’, ‘Iyer517’, ‘linkspotter’, ‘lvplot’, ‘openintro’, ‘pvclust’, ‘rggobi’, ‘scagnostics’, ‘sp’, ‘zenplots’ Warning: package ‘rggobi’ is not available for this version of R A version of this package for your version of R might be available elsewhere, see the ideas at https://cran.r-project.org/doc/manuals/r-devel/R-admin.html#Installing-packages also installing the dependencies ‘pipeR’, ‘rAmCharts’, ‘airports’, ‘cherryblossom’, ‘usdata’, ‘MetricsWeighted’, ‘PairViz’ begin installing package ‘pipeR’ begin installing package ‘airports’ begin installing package ‘cherryblossom’ begin installing package ‘usdata’ begin installing package ‘MetricsWeighted’ begin installing package ‘PairViz’ begin installing package ‘HSAUR2’ begin installing package ‘Iyer517’ begin installing package ‘scagnostics’ begin installing package ‘DendSer’ begin installing package ‘lvplot’ begin installing package ‘acepack’ begin installing package ‘glmnetUtils’ begin installing package ‘pvclust’ begin installing package ‘sp’ * installing *source* package ‘pipeR’ ... ** this is package ‘pipeR’ version ‘0.6.1.3’ ** package ‘pipeR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pipeR) begin installing package ‘rAmCharts’ * installing *source* package ‘airports’ ... ** this is package ‘airports’ version ‘0.1.0’ ** package ‘airports’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (airports) * installing *source* package ‘MetricsWeighted’ ... ** this is package ‘MetricsWeighted’ version ‘1.0.4’ ** package ‘MetricsWeighted’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (MetricsWeighted) begin installing package ‘flashlight’ * installing *source* package ‘cherryblossom’ ... ** this is package ‘cherryblossom’ version ‘0.1.0’ ** package ‘cherryblossom’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cherryblossom) * installing *source* package ‘pvclust’ ... ** this is package ‘pvclust’ version ‘2.2-0’ ** package ‘pvclust’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (pvclust) * installing *source* package ‘HSAUR2’ ... ** this is package ‘HSAUR2’ version ‘1.1-21’ ** package ‘HSAUR2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HSAUR2) * installing *source* package ‘scagnostics’ ... ** this is package ‘scagnostics’ version ‘0.2-6’ ** package ‘scagnostics’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (scagnostics) * installing *source* package ‘DendSer’ ... ** this is package ‘DendSer’ version ‘1.0.3’ ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpuWu0tP/R.INSTALLe40a07fe66ecb/DendSer/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c DendSer_init.c -o DendSer_init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c carct.c -o carct.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cbar.c -o cbar.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c clpl.c -o clpl.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cpl.c -o cpl.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o DendSer.so DendSer_init.o carct.o cbar.o clpl.o cpl.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpuWu0tP/R.INSTALLe40a07fe66ecb/DendSer/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-DendSer/00new/DendSer/libs ** R ** demo ** inst ** byte-compile and prepare package for lazy loading Warning in seriation::set_criterion_method("dist", "BAR", criterion_method_dist_BAR, : Entry with name ‘BAR’ already exists! Modifying entry. ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DendSer) begin installing package ‘condvis2’ * installing *source* package ‘Iyer517’ ... ** this is package ‘Iyer517’ version ‘1.52.0’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Iyer517) * installing *source* package ‘usdata’ ... ** this is package ‘usdata’ version ‘0.3.1’ ** package ‘usdata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (usdata) begin installing package ‘openintro’ * installing *source* package ‘acepack’ ... ** this is package ‘acepack’ version ‘1.6.3’ ** package ‘acepack’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpEEhmvl/R.INSTALLe40a2af2f3df/acepack/src' gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c acedata.f90 -o acedata.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c acemod.f90 -o acemod.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c bakfit.f90 -o bakfit.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c calcmu.f90 -o calcmu.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c ctsub.f90 -o ctsub.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c favas.f90 -o favas.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c mace.f90 -o mace.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c model.f90 -o model.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c montne.f90 -o montne.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c rlsmo.f90 -o rlsmo.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c scail.f90 -o scail.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c smooth.f90 -o smooth.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c smothr.f90 -o smothr.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c sort.f90 -o sort.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c supersmoother.f90 -o supersmoother.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c supsmu.f90 -o supsmu.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o acepack.so acedata.o acemod.o bakfit.o calcmu.o ctsub.o favas.o init.o mace.o model.o montne.o rlsmo.o scail.o smooth.o smothr.o sort.o supersmoother.o supsmu.o -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpEEhmvl/R.INSTALLe40a2af2f3df/acepack/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-acepack/00new/acepack/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (acepack) * installing *source* package ‘PairViz’ ... ** this is package ‘PairViz’ version ‘1.3.6’ ** package ‘PairViz’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (PairViz) begin installing package ‘zenplots’ * installing *source* package ‘flashlight’ ... ** this is package ‘flashlight’ version ‘1.0.0’ ** package ‘flashlight’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (flashlight) * installing *source* package ‘glmnetUtils’ ... ** this is package ‘glmnetUtils’ version ‘1.1.9’ ** package ‘glmnetUtils’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmnetUtils) * installing *source* package ‘condvis2’ ... ** this is package ‘condvis2’ version ‘0.1.2’ ** package ‘condvis2’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (condvis2) * installing *source* package ‘rAmCharts’ ... ** this is package ‘rAmCharts’ version ‘2.1.16’ ** package ‘rAmCharts’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (rAmCharts) begin installing package ‘linkspotter’ * installing *source* package ‘zenplots’ ... ** this is package ‘zenplots’ version ‘1.0.7’ ** package ‘zenplots’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpbTfxqO/R.INSTALLe44202d77697c/zenplots/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c col_split.c -o col_split.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o zenplots.so col_split.o init.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpbTfxqO/R.INSTALLe44202d77697c/zenplots/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-zenplots/00new/zenplots/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (zenplots) * installing *source* package ‘sp’ ... ** this is package ‘sp’ version ‘2.2-1’ ** package ‘sp’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-12) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpHOHqs9/R.INSTALLe40a56cb094a4/sp/src' gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Rcentroid.c -o Rcentroid.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c gcdist.c -o gcdist.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pip.c -o pip.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c pip2.c -o pip2.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c sp_xports.c -o sp_xports.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c surfaceArea.c -o surfaceArea.o gcc-15 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c zerodist.c -o zerodist.o gcc-15 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o sp.so Rcentroid.o gcdist.o init.o pip.o pip2.o sp_xports.o surfaceArea.o zerodist.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpHOHqs9/R.INSTALLe40a56cb094a4/sp/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-sp/00new/sp/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (sp) * installing *source* package ‘linkspotter’ ... ** this is package ‘linkspotter’ version ‘1.3.0’ ** package ‘linkspotter’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (linkspotter) * installing *source* package ‘openintro’ ... ** this is package ‘openintro’ version ‘2.5.0’ ** package ‘openintro’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (openintro) * installing *source* package ‘lvplot’ ... ** this is package ‘lvplot’ version ‘0.2.2’ ** package ‘lvplot’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (lvplot) checking DendSer_1.0.3.tar.gz ... checking bartMan_0.2.1.tar.gz ... checking bullseye_1.0.1.tar.gz ... checking condvis2_0.1.2.tar.gz ... checking corrViz_0.1.0.tar.gz ... checking vivid_0.3.0.tar.gz ... checking condvis_0.5-1.tar.gz ... checking dendextend_1.19.1.tar.gz ... checking idendr0_1.5.3.tar.gz ... checking seriation_1.5.8.tar.gz ... Depends: Package: DendSer Imports: gclus, graphics, seriation, stats, utils Timings: user system elapsed DendSer 23.767 4.149 28.824 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 3 6 Check results summary: DendSer ... OK rdepends_bartMan ... OK rdepends_bullseye ... OK rdepends_condvis ... NOTE * checking for unstated dependencies in ‘demo’ ... NOTE rdepends_condvis2 ... OK rdepends_corrViz ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_dendextend ... OK rdepends_idendr0 ... NOTE * checking for unstated dependencies in ‘demo’ ... NOTE rdepends_seriation ... OK rdepends_vivid ... OK Check results changes: Package: corrViz Check: CRAN incoming feasibility Old result: NOTE Package: idendr0 Check: CRAN incoming feasibility Old result: NOTE