test_LHZ <- function(n.iter) { for(i in 1:n.iter) { set.seed(i) X1 <- mvtnorm::rmvnorm(100, sigma = diag(1, 5), mean = rep(i, 5)) X2 <- mvtnorm::rmvnorm(100, mean = rep(0, 5), sigma = diag(1, 5)) set.seed(i) res.LHZ <- DataSimilarity::LHZ(X1, as.data.frame(X2), seed = i) res.LHZ.perm <- DataSimilarity::LHZ(X1, as.data.frame(X2), seed = i, n.perm = i) res.LHZ.stat <- DataSimilarity::LHZStatistic(X1, X2) testthat::test_that("output type", { # check length and names of output testthat::expect_length(res.LHZ, 7) testthat::expect_length(res.LHZ.perm, 7) testthat::expect_length(res.LHZ.stat, 1) testthat::expect_named(res.LHZ, c("statistic", "p.value", "estimate", "alternative", "method", "data.name", "parameters")) testthat::expect_named(res.LHZ.perm, c("statistic", "p.value", "estimate", "alternative", "method", "data.name", "parameters")) # statistic and p values are not NA testthat::expect_true(is.null(res.LHZ$p.value)) testthat::expect_false(is.na(res.LHZ.perm$p.value)) testthat::expect_false(is.na(res.LHZ$statistic)) testthat::expect_false(is.na(res.LHZ.perm$statistic)) # check p values in [0,1] testthat::expect_lte(res.LHZ.perm$p.value, 1) testthat::expect_gte(res.LHZ.perm$p.value, 0) # output should be htest testthat::expect_s3_class(res.LHZ, "htest") testthat::expect_s3_class(res.LHZ.perm, "htest") }) testthat::test_that("output values", { # check output value of test statistic testthat::expect_equal(res.LHZ$statistic, res.LHZ.stat, check.attributes = FALSE) testthat::expect_equal(res.LHZ.perm$statistic, res.LHZ.stat, check.attributes = FALSE) }) res.LHZ.1 <- DataSimilarity::LHZ(X1[, 1, drop = FALSE], X2[, 1, drop = FALSE], seed = i) res.LHZ.perm.1 <- DataSimilarity::LHZ(X1[, 1, drop = FALSE], X2[, 1, drop = FALSE], seed = i, n.perm = i) res.LHZ.stat.1 <- DataSimilarity::LHZStatistic(X1[, 1, drop = FALSE], X2[, 1, drop = FALSE]) testthat::test_that("output type", { # check length and names of output testthat::expect_length(res.LHZ.1, 7) testthat::expect_length(res.LHZ.perm.1, 7) testthat::expect_length(res.LHZ.stat.1, 1) testthat::expect_named(res.LHZ.1, c("statistic", "p.value", "estimate", "alternative", "method", "data.name", "parameters")) testthat::expect_named(res.LHZ.perm.1, c("statistic", "p.value", "estimate", "alternative", "method", "data.name", "parameters")) # statistic and p values are not NA testthat::expect_true(is.null(res.LHZ.1$p.value)) testthat::expect_false(is.na(res.LHZ.perm.1$p.value)) testthat::expect_false(is.na(res.LHZ$statistic)) testthat::expect_false(is.na(res.LHZ.perm$statistic)) # check p values in [0,1] testthat::expect_lte(res.LHZ.perm.1$p.value, 1) testthat::expect_gte(res.LHZ.perm.1$p.value, 0) # output should be htest testthat::expect_s3_class(res.LHZ.1, "htest") testthat::expect_s3_class(res.LHZ.perm, "htest") }) testthat::test_that("output values", { # check output value of test statistic testthat::expect_equal(res.LHZ.1$statistic, res.LHZ.stat.1, check.attributes = FALSE) testthat::expect_equal(res.LHZ.perm.1$statistic, res.LHZ.stat.1, check.attributes = FALSE) }) } } set.seed(0305) test_LHZ(1)