testBG2 <- function(n.iter) { for(i in 1:n.iter) { set.seed(i) X1 <- mvtnorm::rmvnorm(100, sigma = matrix(0.2, 10, 10) + diag(0.8, 10, 10), mean = runif(10, -2, 2)) X2 <- as.data.frame(mvtnorm::rmvnorm(100, mean = runif(10, -2, 2), sigma = matrix(0.5, 10, 10) + diag(0.5, 10, 10))) res.BG2 <- DataSimilarity::BG2(X1, X2, n.perm = 0, seed = i) res.BG2.perm <- DataSimilarity::BG2(X1, X2, n.perm = 10, seed = i) testthat::test_that("output type", { # check length and names of output testthat::expect_length(res.BG2, 7) testthat::expect_named(res.BG2, c("statistic", "parameter", "p.value", "estimate", "alternative", "method", "data.name")) testthat::expect_length(res.BG2.perm, 7) testthat::expect_named(res.BG2.perm, c("statistic", "parameter", "p.value", "estimate", "alternative", "method", "data.name")) # check p values in [0,1] testthat::expect_lte(res.BG2.perm$p.value, 1) testthat::expect_gte(res.BG2.perm$p.value, 0) testthat::expect_lte(res.BG2$p.value, 1) testthat::expect_gte(res.BG2$p.value, 0) # statistic is not NA testthat::expect_false(is.na(res.BG2$statistic)) testthat::expect_false(is.na(res.BG2.perm$statistic)) # output should be numeric testthat::expect_s3_class(res.BG2, "htest") testthat::expect_s3_class(res.BG2.perm, "htest") }) res.BG2.1 <- DataSimilarity::BG2(X1[, 1, drop = FALSE], X2[, 1, drop = FALSE], n.perm = 0, seed = i) res.BG2.perm.1 <- DataSimilarity::BG2(X1[, 1, drop = FALSE], X2[, 1, drop = FALSE], n.perm = 10, seed = i) testthat::test_that("output type", { # check length and names of output testthat::expect_length(res.BG2.1, 7) testthat::expect_named(res.BG2.1, c("statistic", "parameter", "p.value", "estimate", "alternative", "method", "data.name")) testthat::expect_length(res.BG2.perm.1, 7) testthat::expect_named(res.BG2.perm.1, c("statistic", "parameter", "p.value", "estimate", "alternative", "method", "data.name")) # check p values in [0,1] testthat::expect_lte(res.BG2.perm.1$p.value, 1) testthat::expect_gte(res.BG2.perm.1$p.value, 0) testthat::expect_lte(res.BG2.1$p.value, 1) testthat::expect_gte(res.BG2.1$p.value, 0) # statistic is not NA testthat::expect_false(is.na(res.BG2.1$statistic)) testthat::expect_false(is.na(res.BG2.perm.1$statistic)) # output should be numeric testthat::expect_s3_class(res.BG2.1, "htest") testthat::expect_s3_class(res.BG2.perm.1, "htest") }) # cannot test results against any function } } set.seed(0305) testBG2(2)