* using log directory 'd:/RCompile/CRANincoming/R-devel/DIRMR.Rcheck'
* using R Under development (unstable) (2024-06-11 r86723 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 13.2.0
    GNU Fortran (GCC) 13.2.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'DIRMR/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'DIRMR' version '0.4.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Guangbao Guo <ggb11111111@163.com>'

New submission

Possibly misspelled words in DESCRIPTION:
  Guo (10:313)
  MOPXEM (10:67)
  PXEM (10:50)
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'DIRMR' can be installed ... WARNING
Found the following significant warnings:
  Warning: replacing previous import 'matrixcalc::vec' by 'lava::vec' when loading 'DIRMR'
See 'd:/RCompile/CRANincoming/R-devel/DIRMR.Rcheck/00install.out' for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  'data' 'df1'
Undocumented data sets:
  'data' 'df1'
All user-level objects in a package should have documentation entries.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... WARNING
Undocumented arguments in Rd file 'DPXEM.Rd'
  'data' 'df1'
Documented arguments not in \usage in Rd file 'DPXEM.Rd':
  'data1' 'data2'

Functions with \usage entries need to have the appropriate \alias
entries, and all their arguments documented.
The \usage entries must correspond to syntactically valid R code.
See chapter 'Writing R documentation files' in the 'Writing R
Extensions' manual.
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking LazyData ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [374s] ERROR
Running examples in 'DIRMR-Ex.R' failed
The error most likely occurred in:

> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: MCEM
> ### Title: MCEM
> ### Aliases: MCEM
> 
> ### ** Examples
> 
> set.seed(99)
> library(MASS)
> library(matrixcalc)
> library(mvtnorm)
> n=600;p=10;q=5;M=5;omega=0.15;ratio=0.1;maxiter=1500;nob=round(n-(n*ratio))
> dd.start=1;sigma2_e.start=1
> X0=matrix(runif(n*p,0,2),ncol=p)
> beta=matrix(rnorm(p*1,0,3),nrow=p)
> Z0=matrix(runif(n*q,2,3),ncol=q)
> e=matrix(rnorm(n*1,0,sigma2_e.start),n,1)
> b=matrix(rnorm(q*1,0,1),q,1)
> Y0=X0
> df1=data.frame(Y=Y0,X=X0,Z=Z0)
> misra=function(data,ratio){
+   nob=round(n-(n*ratio))
+   data[sample(n,n-nob),1]=NA
+   return(data)}
> data=misra(data=df1,ratio=0.1)
> MCEM(data,df1,maxiter=1500)
Error: object 'Kappa' not found
Execution halted
Examples with CPU (user + system) or elapsed time > 10s
        user system elapsed
ECME  342.29   4.20  346.50
DECME  20.76   0.99   21.75
* checking PDF version of manual ... [12s] OK
* checking HTML version of manual ... OK
* DONE
Status: 1 ERROR, 3 WARNINGs, 1 NOTE