* using log directory 'd:/RCompile/CRANincoming/R-devel/DDESONN.Rcheck' * using R Under development (unstable) (2026-02-12 r89409 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 14.3.0 GNU Fortran (GCC) 14.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * current time: 2026-02-13 19:40:45 UTC * checking for file 'DDESONN/DESCRIPTION' ... OK * checking extension type ... Package * this is package 'DDESONN' version '7.1.0' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Mathew William Armitage Fok ' New submission Possibly misspelled words in DESCRIPTION: AUPRC (31:5) Lookahead (26:5) RMSProp (25:51) SGD (25:46) backends (13:5) backpropagation (11:44) multiclass (19:5) runtimes (15:53) Package has a VignetteBuilder field but no prebuilt vignette index. Found the following (possibly) invalid URLs: URL: https://cran.r-project.org/web/packages/olr/index.html From: README.md Status: 200 Message: OK CRAN URL not in canonical form The canonical URL of the CRAN page for a package is https://CRAN.R-project.org/package=pkgname Size of tarball: 14604825 bytes * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking whether package 'DDESONN' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [46s] NOTE apply_optimizer_update: warning in nag_update(params = optimizer_params[[layer]], grads = grads_input, lr = lr * layer_boost, beta = beta1): partial argument match of 'beta' to 'beta1' .write_fused_consensus: no visible binding for global variable 'run_index' .write_fused_consensus: no visible binding for global variable 'RUN_INDEX' .write_fused_consensus: no visible binding for global variable 'seed' .write_fused_consensus: no visible binding for global variable 'SEED' DDESONN_predict_eval: no visible binding for global variable 'ML_NN' EvaluatePredictionsReport: no visible binding for global variable 'fpr' EvaluatePredictionsReport: no visible binding for global variable 'tpr' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'Predicted' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'Actual' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'Count' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'prob' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'label' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'prob_bin' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'actual_rate' EvaluatePredictionsReport : maybe_plot_binary: no visible binding for global variable 'bin_mid' EvaluatePredictionsReport: no visible binding for global variable 'Type' EvaluatePredictionsReport: no visible binding for global variable 'Predicted' EvaluatePredictionsReport: no visible binding for global variable 'Actual' EvaluatePredictionsReport: no visible binding for global variable 'Count' apply_optimizer_update: no visible binding for global variable 'lookahead_step' apply_optimizer_update: no visible binding for global variable 'lambda' apply_optimizer_update: no visible binding for global variable 'errors' calculate_performance: no visible binding for global variable 'dropout_rates' find_best_model: no visible binding for global variable '.BM_DIR' ftrl_update: no visible binding for global variable 'beta1' gelu: no visible global function definition for 'erf' gelu_derivative: no visible global function definition for 'erf' Undefined global functions or variables: .BM_DIR Actual Count ML_NN Predicted RUN_INDEX SEED Type actual_rate beta1 bin_mid dropout_rates erf errors fpr label lambda lookahead_step prob prob_bin run_index seed tpr * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [256s] OK * checking PDF version of manual ... [34s] OK * checking HTML version of manual ... OK * DONE Status: 2 NOTEs