test_that("use", { skip_if(Sys.getenv("CI") == "", message = "Run only on CI") skip_on_cran() utils::data(Macaronesia_datalist, package = "DAISIE") tested_MLE <- DAISIE_ML2( datalist = Macaronesia_datalist, initparsopt = c( 1.053151832, 0.052148979, 0.512939011, 0.133766934, 0.152763179 ), idparsmat = rbind( 1:5, c(6, 2, 3, 7, 5), 1:5,1:5 ), idparsopt = c(2, 4, 5, 6, 7), parsfix = c(0, Inf), idparsfix = c(1, 3), tol = c(0.01, 0.1, 0.001), res = 15, tolint = c(0.1, 0.01), verbose = 0 ) expected_MLE <- data.frame( lambda_c = c(0.0, 0.315015693879739, 0.0, 0.0), mu = c(2.67928476648249, 2.67928476648249, 2.67928476648249, 2.67928476648249), K = c(Inf, Inf, Inf, Inf), gamma = c(0.141748213992604, 0.338044376412124, 0.141748213992604, 0.141748213992604), lambda_a = c(1.10809210249609, 1.10809210249609, 1.10809210249609 , 1.10809210249609), loglik = c(-409.60117813893, -409.60117813893, -409.60117813893, -409.60117813893), df = c(5L, 5L, 5L, 5L), conv = c(0L, 0L, 0L, 0L) ) testthat::expect_equal(tested_MLE, expected_MLE) }) test_that("abuse", { skip_if(Sys.getenv("CI") == "", message = "Run only on CI") skip_on_cran() testthat::expect_error(tested_MLE <- DAISIE_ML2( datalist = "nonsense", initparsopt = c( 1.053151832, 0.052148979, 0.512939011, 0.133766934, 0.152763179 ), idparsmat = rbind( 1:5, c(6, 2, 3, 7, 5), 1:5,1:5 ), idparsopt = c(2, 4, 5, 6, 7), parsfix = c(0, Inf), idparsfix = c(1, 3), tol = c(0.01, 0.1, 0.001), res = 15, tolint = c(0.1, 0.01) )) })