* installing *source* package 'CoxPlus' ... ** this is package 'CoxPlus' version '1.5.4' ** using staged installation ** libs using C++ compiler: 'g++.exe (GCC) 14.3.0' g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32, from RcppExports.cpp:4: D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ g++ -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG -I../inst/include -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include" -pedantic -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c coxReg.cpp -o coxReg.o In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:26, from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo/interface/RcppArmadilloForward.h:57, from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/RcppArmadillo.h:32, from coxReg.cpp:14: D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/config.hpp:373:72: note: '#pragma message: NOTE: option ARMA_CRIPPLED_LAPACK is not supported' 373 | #pragma message ("NOTE: option ARMA_CRIPPLED_LAPACK is not supported") | ^ coxReg.cpp: In member function 'void CoxReg::estimateNormal()': coxReg.cpp:560:78: warning: 'eT arma::Mat::max(arma::uword&) const [with eT = double; arma::uword = unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations] 560 | xbeta_est.max(index); | ~~~~~~~~~~~~~^~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:201: D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/Mat_bones.hpp:545:56: note: declared here 545 | [[deprecated("use .index_max() instead")]] inline eT max(uword& index_of_max_val) const; | ^~~ coxReg.cpp:563:78: warning: 'eT arma::Mat::min(arma::uword&) const [with eT = double; arma::uword = unsigned int]' is deprecated: use .index_min() instead [-Wdeprecated-declarations] 563 | xbeta_est.min(index); | ~~~~~~~~~~~~~^~~~~~~ D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/Mat_bones.hpp:544:56: note: declared here 544 | [[deprecated("use .index_min() instead")]] inline eT min(uword& index_of_min_val) const; | ^~~ coxReg.cpp: In member function 'void CoxReg::getRobustV()': coxReg.cpp:847:70: warning: 'eT arma::Mat::max(arma::uword&) const [with eT = double; arma::uword = unsigned int]' is deprecated: use .index_max() instead [-Wdeprecated-declarations] 847 | xbeta_est.max(index); | ~~~~~~~~~~~~~^~~~~~~ In file included from D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo:692: D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7850:1: note: declared here 7850 | Mat::max(uword& index_of_max_val) const | ^~~~~~~ coxReg.cpp:850:70: warning: 'eT arma::Mat::min(arma::uword&) const [with eT = double; arma::uword = unsigned int]' is deprecated: use .index_min() instead [-Wdeprecated-declarations] 850 | xbeta_est.min(index); | ~~~~~~~~~~~~~^~~~~~~ D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include/current/armadillo_bits/Mat_meat.hpp:7829:1: note: declared here 7829 | Mat::min(uword& index_of_min_val) const | ^~~~~~~ g++ -std=gnu++17 -shared -s -static-libgcc -o CoxPlus.dll tmp.def RcppExports.o coxReg.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-CoxPlus/00new/CoxPlus/libs/x64 ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CoxPlus)