test_that( "Poisson residual no error", { a <- c(0,1,2,3,4,5,6) b <- c(1,2,3,4,5,6,7) c <- c(0,1,0,0,0,1,0) d <- c(3,4,5,6,7,8,9) e <- c(0,0,0,1,1,1,1) df <- data.table( "a"=a, "b"=b, "c"=c, "d"=d,"e"=e) time1 <- "a" time2 <- "b" event <- "c" pyr <- "a" names <- c( "d" ) term_n <- c(0) tform <- c( "loglin" ) keep_constant <- c(0) a_n <- c(-0.1) modelform <- "M" fir <- 0 der_iden <- 0 tfile <- file(paste(tempfile(), ".txt",sep="" ),open = "wt") sink(file=tfile) control <- list( "ncores"=2, 'lr' = 0.95, 'maxiter' = -1, 'halfmax' = 1, 'epsilon' = 1e-9, 'deriv_epsilon' = 1e-9, 'abs_max'=1.0, 'change_all'=TRUE, 'dose_abs_max'=1.0, 'verbose'=4, 'double_step'=1) model_control <- list( 'pearson'=F, 'deviance'=F) expect_no_error(RunPoissonRegression_Residual(df, pyr, event, names, term_n, tform, keep_constant, a_n, modelform, fir, der_iden, control,strat_col='rand',model_control)) model_control <- list( 'pearson'=T, 'deviance'=F) expect_no_error(RunPoissonRegression_Residual(df, pyr, event, names, term_n, tform, keep_constant, a_n, modelform, fir, der_iden, control,strat_col='rand',model_control)) model_control <- list( 'pearson'=F, 'deviance'=T) expect_no_error(RunPoissonRegression_Residual(df, pyr, event, names, term_n, tform, keep_constant, a_n, modelform, fir, der_iden, control,strat_col='rand',model_control)) # model_control <- list( 'pearson'=F, 'deviance'=F, 'strata'=T) expect_no_error(RunPoissonRegression_Residual(df, pyr, event, names, term_n, tform, keep_constant, a_n, modelform, fir, der_iden, control,strat_col='e',model_control)) sink(NULL) close(tfile) })