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Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(testthat) > library(CohortConstructor) > > test_check("CohortConstructor") Starting 2 test processes [ FAIL 1 | WARN 7 | SKIP 128 | PASS 60 ] ══ Skipped tests (128) ═════════════════════════════════════════════════════════ • On CRAN (128): 'test-addIndex.R:2:3', 'test-addIndex.R:24:3', 'test-benchmark.R:2:3', 'test-collapseCohorts.R:2:3', 'test-collapseCohorts.R:116:3', 'test-collapseCohorts.R:190:3', 'test-collapseCohorts.R:256:3', 'test-copyCohorts.R:2:3', 'test-copyCohorts.R:52:3', 'test-deathCohort.R:2:3', 'test-deathCohort.R:64:3', 'test-deathCohort.R:132:3', 'test-deathCohort.R:191:3', 'test-deathCohort.R:248:3', 'test-deathCohort.R:328:3', 'test-deathCohort.R:417:3', 'test-demographicsCohort.R:2:3', 'test-demographicsCohort.R:43:3', 'test-demographicsCohort.R:80:3', 'test-demographicsCohort.R:111:3', 'test-demographicsCohort.R:148:3', 'test-demographicsCohort.R:220:3', 'test-entryAtColumnDate.R:2:3', 'test-entryAtColumnDate.R:105:3', 'test-entryAtColumnDate.R:230:3', 'test-exitAtColumnDate.R:2:3', 'test-exitAtColumnDate.R:108:3', 'test-exitAtColumnDate.R:221:3', 'test-exitAtColumnDate.R:300:3', 'test-exitAtDate.R:2:3', 'test-exitAtDate.R:164:3', 'test-exitAtDate.R:261:3', 'test-intersectCohorts.R:2:3', 'test-intersectCohorts.R:53:3', 'test-intersectCohorts.R:104:3', 'test-intersectCohorts.R:151:3', 'test-intersectCohorts.R:209:3', 'test-intersectCohorts.R:290:3', 'test-intersectCohorts.R:341:3', 'test-intersectCohorts.R:398:3', 'test-intersectCohorts.R:499:3', 'test-intersectCohorts.R:607:3', 'test-intersectCohorts.R:664:3', 'test-intersectCohorts.R:705:3', 'test-matchCohorts.R:2:3', 'test-matchCohorts.R:80:3', 'test-matchCohorts.R:126:3', 'test-matchCohorts.R:187:3', 'test-matchCohorts.R:288:3', 'test-matchCohorts.R:319:3', 'test-measurementCohort.R:2:3', 'test-measurementCohort.R:337:3', 'test-measurementCohort.R:495:3', 'test-measurementCohort.R:554:3', 'test-padCohortDate.R:2:3', 'test-padCohortDate.R:58:3', 'test-padCohortDate.R:139:3', 'test-padCohortDate.R:179:3', 'test-padCohortDate.R:333:3', 'test-padCohortDate.R:371:3', 'test-renameCohort.R:2:3', 'test-requireCohortIntersect.R:2:3', 'test-requireCohortIntersect.R:178:3', 'test-requireCohortIntersect.R:225:3', 'test-requireCohortIntersect.R:344:3', 'test-requireCohortIntersect.R:426:3', 'test-requireConceptIntersect.R:2:3', 'test-requireConceptIntersect.R:158:3', 'test-requireConceptIntersect.R:276:3', 'test-requireConceptIntersect.R:384:3', 'test-requireConceptIntersect.R:468:3', 'test-requireDateRange.R:2:3', 'test-requireDateRange.R:153:3', 'test-requireDateRange.R:264:3', 'test-requireDemographics.R:2:3', 'test-requireDemographics.R:172:3', 'test-requireDemographics.R:219:3', 'test-requireDemographics.R:295:3', 'test-requireDemographics.R:321:3', 'test-requireDemographics.R:388:3', 'test-requireDemographics.R:420:3', 'test-requireDemographics.R:441:3', 'test-requireIsEntry.R:2:3', 'test-requireIsEntry.R:49:3', 'test-requireIsEntry.R:114:3', 'test-requireIsEntry.R:128:3', 'test-requireIsEntry.R:199:3', 'test-requireIsEntry.R:340:3', 'test-requireMinCohortCount.R:2:3', 'test-requireMinCohortCount.R:125:3', 'test-requireTableIntersect.R:2:3', 'test-requireTableIntersect.R:284:3', 'test-requireTableIntersect.R:400:3', 'test-sampleCohorts.R:2:3', 'test-sampleCohorts.R:36:3', 'test-sampleCohorts.R:67:3', 'test-sampleCohorts.R:88:3', 'test-sampleCohorts.R:111:3', 'test-sampleCohorts.R:134:3', 'test-stratifyCohorts.R:2:3', 'test-stratifyCohorts.R:130:3', 'test-subsetCohorts.R:2:3', 'test-subsetCohorts.R:83:3', 'test-subsetCohorts.R:139:3', 'test-subsetCohorts.R:159:3', 'test-trimDemographics.R:2:3', 'test-trimDemographics.R:325:3', 'test-trimDemographics.R:447:3', 'test-unionCohorts.R:2:3', 'test-unionCohorts.R:124:3', 'test-unionCohorts.R:262:3', 'test-unionCohorts.R:316:3', 'test-unionCohorts.R:438:3', 'test-unionCohorts.R:464:3', 'test-unionCohorts.R:517:3', 'test-yearCohorts.R:2:3', 'test-yearCohorts.R:150:3', 'test-yearCohorts.R:251:3', 'test-conceptCohort.R:2:3', 'test-conceptCohort.R:179:3', 'test-conceptCohort.R:209:3', 'test-conceptCohort.R:256:3', 'test-conceptCohort.R:466:3', 'test-conceptCohort.R:512:3', 'test-conceptCohort.R:584:3', 'test-conceptCohort.R:641:3', 'test-conceptCohort.R:705:3', 'test-conceptCohort.R:917:3' ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-conceptCohort.R:1312:3'): conceptSetExpression ───────────────── Error in `checkPath(inputs[["path"]])`: Invalid path: D:/RCompile/CRANincoming/extras/ConceptSet Backtrace: ▆ 1. └─CodelistGenerator::codesFromConceptSet(...) at test-conceptCohort.R:1312:3 2. └─CodelistGenerator:::checkInputs(path = path, cdm = cdm) 3. └─base::lapply(...) 4. └─CodelistGenerator (local) FUN(X[[i]], ...) 5. ├─base::eval(...) 6. │ └─base::eval(...) 7. └─CodelistGenerator:::checkPath(inputs[["path"]]) 8. └─cli::cli_abort(glue::glue("Invalid path: {path}")) 9. └─rlang::abort(...) [ FAIL 1 | WARN 7 | SKIP 128 | PASS 60 ] Error: Test failures Execution halted