downloading reverse dependencies ... downloading PhenotypeR_0.1.4.tar.gz ... ok downloading CohortConstructor_0.4.0.tar.gz ... ok downloading OmopSketch_0.4.0.tar.gz ... ok downloading OmopViewer_0.3.0.tar.gz ... ok installing dependencies ‘CirceR’, ‘CohortCharacteristics’, ‘CohortConstructor’, ‘DrugUtilisation’, ‘IncidencePrevalence’, ‘omock’, ‘OmopSketch’, ‘OmopViewer’, ‘reactablefmtr’, ‘shinyTree’ begin installing package ‘CohortConstructor’ begin installing package ‘DrugUtilisation’ begin installing package ‘CohortCharacteristics’ begin installing package ‘omock’ begin installing package ‘IncidencePrevalence’ begin installing package ‘reactablefmtr’ begin installing package ‘CirceR’ begin installing package ‘OmopViewer’ begin installing package ‘shinyTree’ * installing *source* package ‘CirceR’ ... ** this is package ‘CirceR’ version ‘1.3.3’ ** package ‘CirceR’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CirceR) * installing *source* package ‘shinyTree’ ... ** this is package ‘shinyTree’ version ‘0.3.1’ ** package ‘shinyTree’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (shinyTree) * installing *source* package ‘OmopViewer’ ... ** this is package ‘OmopViewer’ version ‘0.3.0’ ** package ‘OmopViewer’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopViewer) * installing *source* package ‘omock’ ... ** this is package ‘omock’ version ‘0.3.2’ ** package ‘omock’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (omock) * installing *source* package ‘CohortCharacteristics’ ... ** this is package ‘CohortCharacteristics’ version ‘1.0.0’ ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortCharacteristics) * installing *source* package ‘IncidencePrevalence’ ... ** this is package ‘IncidencePrevalence’ version ‘1.2.0’ ** package ‘IncidencePrevalence’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (IncidencePrevalence) * installing *source* package ‘DrugUtilisation’ ... ** this is package ‘DrugUtilisation’ version ‘1.0.2’ ** package ‘DrugUtilisation’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (DrugUtilisation) * installing *source* package ‘reactablefmtr’ ... ** this is package ‘reactablefmtr’ version ‘2.0.0’ ** package ‘reactablefmtr’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (reactablefmtr) * installing *source* package ‘CohortConstructor’ ... ** this is package ‘CohortConstructor’ version ‘0.4.0’ ** package ‘CohortConstructor’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CohortConstructor) begin installing package ‘OmopSketch’ * installing *source* package ‘OmopSketch’ ... ** this is package ‘OmopSketch’ version ‘0.4.0’ ** package ‘OmopSketch’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (OmopSketch) checking CohortCharacteristics_1.0.0.tar.gz ... checking PhenotypeR_0.1.4.tar.gz ... checking CohortConstructor_0.4.0.tar.gz ... checking OmopSketch_0.4.0.tar.gz ... checking OmopViewer_0.3.0.tar.gz ... Depends: Package: CohortCharacteristics Depends: R (>= 4.1) Imports: CDMConnector (>= 1.6.0), dplyr, tidyr, rlang, cli, stringr, omopgenerics (>= 1.2.0), PatientProfiles (>= 1.3.1), snakecase, lifecycle, purrr Timings: user system elapsed CohortCharacteristics 406.363 17.875 325.539 Results: Check status summary: ERROR NOTE OK Source packages 0 1 0 Reverse depends 1 0 3 Check results summary: CohortCharacteristics ... NOTE * checking examples ... [14s/14s] NOTE rdepends_CohortConstructor ... OK rdepends_OmopSketch ... OK rdepends_OmopViewer ... OK rdepends_PhenotypeR ... ERROR * checking re-building of vignette outputs ... [448s/218s] ERROR Check results changes: Package: PhenotypeR Check: re-building of vignette outputs New result: ERROR