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Type 'q()' to quit R. > library(CodeDepends) > > > res7 = getInputs(quote(x <- names(y[a:5])[w])) > stopifnot(identical(res7@inputs, c("y", "a", "w")), + identical(res7@outputs, "x"), + identical(res7@code, quote(x <- names(y[a:5])[w]))) > > > > ## regression test to ensure formulaInputs argument functions correctly > res10a = getInputs(quote(lm(x~y))) > stopifnot(identical(res10a@inputs, character())) > res10b = getInputs(quote(lm(x~y)), formulaInputs = TRUE) > stopifnot(identical(res10b@inputs, c("x", "y"))) > > ## regression tests for passing functions directly to getInputs > > ## function with {} and multiple expressions > f = function(a = 5, b, c = 7) { + d = a + b + 5 + df = data.frame(a = a, b = b) + fit =lm(b~a, data = df) + fit + } > > res11 = getInputs(f) > ## one ScriptNodeInfo for the formals, then 5 for the body > stopifnot(length(res11) == 6, + identical(res11[[5]]@inputs, "df"), + identical(res11[[5]]@outputs, "fit"), + identical(res11[[5]]@functions, c("lm" = FALSE, "~" = FALSE)), + identical(res11[[5]]@nsevalVars, c("b", "a")) + ) > > ## function with single expressoin (call) with no {} > fsmall = function(a = 5, b, c = 7) a+b+c > > res11b = getInputs(fsmall) > stopifnot(length(res11b) == 2, + identical(res11b[[1]]@outputs, c("a", "b", "c")), + identical(res11b[[2]]@inputs, c("a", "b", "c"))) > > ## does it know where functions that live in base packages come from (ie do they get FALSE) > ## also does passing expressions directly to readScript work? > ## We have to do this because it only tries to figure out function locality > ## when it's given a script, not for individual expressions > ## XXX change this for base package funs? > > res12 = getInputs(readScript(txt = quote(x <- rnorm(10)+ Rcmd("This would never work!")))) > > stopifnot(identical(res12[[1]]@functions, c("+" = FALSE, rnorm = FALSE, Rcmd = FALSE))) > > > ## do functions called via the *apply statements show up in funs rather than inputs? > ## including when specified out of order via FUN argument > > res13 = getInputs(quote(y <- lapply(x, mean, na.rm=narm))) > stopifnot(identical(res13@outputs, "y"), + identical(res13@inputs, c("x", "narm")), + identical(res13@functions, c(lapply = NA, mean = NA))) > > res13b = getInputs(quote(y <- lapply(FUN=mean, x, na.rm=narm))) > stopifnot(identical(res13b@outputs, "y"), + identical(res13b@inputs, c("x", "narm")), + identical(res13b@functions, c(lapply = NA, mean = NA))) > > res14 = getInputs(quote(y <- apply(x,1, mean, na.rm=narm))) > stopifnot(identical(res14@outputs, "y"), + identical(res14@inputs, c("x", "narm")), + identical(res14@functions, c(apply = NA, mean = NA))) > > > res15 = getInputs(quote(y <- mapply(mean, x = stuff, y = things))) > stopifnot(identical(res15@outputs, "y"), + identical(res15@inputs, c( "stuff", "things")), + identical(res15@functions, c(mapply = NA, mean = NA))) > > res13c = getInputs(quote(y <- sapply(x, mean, na.rm=narm))) > stopifnot(identical(res13c@outputs, "y"), + identical(res13c@inputs, c("x", "narm")), + identical(res13c@functions, c(sapply = NA, mean = NA))) > > > ## do we catch updates correctly in all their various forms > > res1 = getInputs(quote( x [ z > 0 ] <- 2 * y )) # outputs should be x and inputs x, z, y > stopifnot(identical(res1@updates, "x"), + identical(res1@outputs, character()), + identical(res1@inputs, c("x", "z", "y"))) > > res2 = getInputs(quote( foo(x) <- 1)) #updates and inputes are both "x" > stopifnot(identical(res2@inputs, "x"), + identical(res2@outputs, character()), + identical(res2@updates, "x")) > > res3 = getInputs(quote( foo(x) <- a)) # updates is "x", inputs is x, a > stopifnot(identical(res3@inputs, c("x", "a")), + identical(res3@updates, "x"), + identical(res3@outputs, character())) > > > > res4 = getInputs(quote( x$foo <- a)) > stopifnot(identical(res4@inputs, c("x", "a")), + identical(res4@updates, "x"), + identical(res4@outputs, character())) > > res5 = getInputs(quote( x[[foo]] <- a)) # outputs is "x", inputs is x, foo, a > stopifnot(identical(res5@inputs, c("x", "foo", "a")), + identical(res5@outputs, character()), + identical(res5@updates, "x")) > > res6 = getInputs(quote( x[["foo"]] <- a)) # outputs is "x", inputs is x, a > stopifnot(identical(res6@inputs, c("x", "a")), + identical(res6@strings, "foo"), + identical(res6@updates, "x"), + identical(res6@outputs, character())) > > res8 = getInputs(quote(x[x>0] <- 5)) > stopifnot(identical(res8@inputs, "x"), + identical(res8@outputs, character()), + identical(res8@updates, "x")) > > res9 = getInputs(quote(x <- lapply(1:10, function(i) x[[10-i]]))) > stopifnot(identical(res9@inputs, "x"), + identical(res9@outputs, character()), + identical(res9@updates, "x")) > > ## pipe handling and apply/map style function invocation play nicely > ## together > > res15 = getInputs(quote(1:10 %>% map_int(rnorm, sd = sample(1:10)))) > stopifnot(identical(res15@inputs, character())) > stopifnot(identical(res15@functions, c("%>%" = NA, map_int = NA, + rnorm = NA, sample = NA, + ":" = NA))) > > ## test that we now remember package loads across expressions and that the filter > ## handler uses that > > ## test that nested calls within pipes behave correctly wrt identifying nseval vs standard > ## eval inputs > > scr16 = readScript(txt = "library(dplyr); df %>% left_join(filter(df2, colname > 6))") > res16 = getInputs(scr16) > stopifnot(identical(res16[[2]]@inputs, c("df2", "df"))) > stopifnot(identical(res16[[2]]@nsevalVars, "colname")) > > > ## filter regression test and test differentiation heuristic > > scr17 = readScript(txt = "library(dplyr); filter(df, x>5)") > res17 = getInputs(scr17) > stopifnot(identical(res17[[2]]@inputs, "df")) > stopifnot(identical(res17[[2]]@nsevalVars, "x")) > > scr18 = readScript(txt = "filter(df, x>5)") > res18 = getInputs(scr18) > stopifnot(identical(res18[[1]]@inputs, c("df", "x"))) > stopifnot(length(res18[[1]]@nsevalVars) == 0) > > > ## regression test for handling of inlined NativeSymbols by default > ## handler, which includes Rcpp "functions" compiled > ## from R > ## > ## Can't figure out how to get this not to barf during R CMD check :( > > ## library(Rcpp) > ## sourceCpp( system.file("unitTests/rcppfun.cpp", package="CodeDepends")) > ## res19 = getInputs(convolve3cpp) > > > ## stopifnot(identical(res19[[1]]@outputs, c("a", "b")), > ## identical(res19[[2]]@inputs, c("a", "b"))) > > proc.time() user system elapsed 0.56 0.15 0.67