R Under development (unstable) (2025-06-12 r88305 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
> 
> library(testthat)
> library(CoDaLoMic)
> 
> test_check("CoDaLoMic")
% latex table generated in R 4.6.0 by xtable 1.8-4 package
% Fri Jun 13 13:58:39 2025
\begin{table}[ht]
\centering
\begin{tabular}{lllll}
  \toprule
 SPBal  & NUM/DEM & Bacteria & SPBal mean & Genera most \\ 
  (\% of variance) &  & in & (Relation between & influenced by \\ 
   &  & NUM/DEM & NUM/DEM) & the SPBal \\ 
   \midrule
SPBal1 & NUM & 3,4 & -0.301 &  \\ 
  (41.37\%) & DEM & 1 & (Similar) &  \\ 
   \midrule
SPBal2 & NUM & 3 & -0.398 &  \\ 
  (21.08\%) & DEM & 5 & (Similar) &  \\ 
   \midrule
SPBal3 & NUM & 2 & 0.085 &  \\ 
  (19.17\%) & DEM & 4 & (Similar) &  \\ 
   \bottomrule
\end{tabular}
\caption{We rename each bacteria with a number so 1  is  Bact1, 2  is  Bact2, 3  is  Bact3, 4  is  Bact4, 5  is  Bact5} 
\end{table}
% latex table generated in R 4.6.0 by xtable 1.8-4 package
% Fri Jun 13 13:58:39 2025
\begin{table}[ht]
\centering
\begin{tabular}{llll}
  \toprule
 Name & Intercept  & Weight & Weight \\ 
   &  & of the bacteria & of the rest \\ 
   &  & in defining herself  & of the community  \\ 
   &  & in the next & in defining the \\ 
   &  & time point & bacteria in the \\ 
   &  &  & next time point \\ 
   \midrule
Bact1 & 1 & 2 & 3 \\ 
  Bact2 & 1 & 2 & 3 \\ 
   \bottomrule
\end{tabular}
\end{table}
% latex table generated in R 4.6.0 by xtable 1.8-4 package
% Fri Jun 13 13:58:39 2025
\begin{table}[ht]
\centering
\begin{tabular}{llll}
  \toprule
 Names & Weight that & Weight that &  \\ 
   & the bacteria has & the interaction of &  \\ 
   & in defining & both bacteria &  \\ 
   & herself in the & has in defining &  \\ 
   & next time point & the bacteria in &  \\ 
   &  & in the row in the &  \\ 
   &  & next time point &  \\ 
   \midrule
 &  & a & b \\ 
   \midrule
a & 0.1 & 0.2 & 0.3 \\ 
  b & 0.4 & 0.5 & 0.6 \\ 
   \bottomrule
\end{tabular}
\end{table}
[ FAIL 0 | WARN 0 | SKIP 0 | PASS 71 ]
> 
> proc.time()
   user  system elapsed 
  54.31    1.17  147.87