* using log directory 'd:/RCompile/CRANincoming/R-devel/ClassDiscovery.Rcheck' * using R Under development (unstable) (2024-04-27 r86487 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.2.0 GNU Fortran (GCC) 13.2.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'ClassDiscovery/DESCRIPTION' ... OK * this is package 'ClassDiscovery' version '3.4.5' * checking CRAN incoming feasibility ... Note_to_CRAN_maintainers Maintainer: 'Kevin R. Coombes ' * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'ClassDiscovery' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking 'build' directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking sizes of PDF files under 'inst/doc' ... OK * checking installed files from 'inst/doc' ... OK * checking files in 'vignettes' ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... OK Running 'exprSet-example.R' Comparing 'exprSet-example.Rout' to 'exprSet-example.Rout.save' ... OK Running 'test00-color.R' Comparing 'test00-color.Rout' to 'test00-color.Rout.save' ... OK Running 'test01-distance.R' Comparing 'test01-distance.Rout' to 'test01-distance.Rout.save' ... OK Running 'test02-cluster.R' Comparing 'test02-cluster.Rout' to 'test02-cluster.Rout.save' ... OK Running 'test02.1-just.R' Comparing 'test02.1-just.Rout' to 'test02.1-just.Rout.save' ... OK Running 'test03-boot.R' Comparing 'test03-boot.Rout' to 'test03-boot.Rout.save' ... OK Running 'test04-perturb.R' Comparing 'test04-perturb.Rout' to 'test04-perturb.Rout.save' ... OK Running 'test04.1-gpca.R' Comparing 'test04.1-gpca.Rout' to 'test04.1-gpca.Rout.save' ... OK Running 'test05-spca.R' Comparing 'test05-spca.Rout' to 'test05-spca.Rout.save' ... OK Running 'test06-mosaic.R' Comparing 'test06-mosaic.Rout' to 'test06-mosaic.Rout.save' ... OK Running 'test07-pcanova.R' Comparing 'test07-pcanova.Rout' to 'test07-pcanova.Rout.save' ... OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [25s] OK * checking PDF version of manual ... [14s] OK * checking HTML version of manual ... OK * DONE Status: OK