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Type 'q()' to quit R. > library(testthat) > test_check("Characterization") Loading required package: Characterization Initiating cluster consisting only of main thread Constructing during cohort covariates Initiating cluster consisting only of main thread Constructing during cohort covariates Constructing during cohort covariates Constructing during cohort covariates Removing values less than 5 from val Removing values less than 50 from val Removing values less than 5 from val Removing values less than 5 from val and val2 Removing values less than 5 from val and val2 Removing values less than 5 from val3 Removing sumValue counts less than 10000 Removing sumValue counts less than 10 Removing caseSumValue counts less than 10 Removing nonCaseSumValue counts less than 10 Removing beforeSumValue counts less than 10 Removing duringSumValue counts less than 10 Removing afterSumValue counts less than 10 Removing numEvents less than 10 Censoring numExposureEras counts less than 5 Censoring numPersonsExposed counts less than 5 Censoring numCases counts less than 5 Censoring/removing dechallengeAttempt counts less than 5 Censoring/removing DECHALLENGE FAIL or SUCCESS counts less than 5 Censoring/removing rechallenge_attempt counts less than 5 Censoring/removing rechallenge_fail or rechallenge_success counts less than 5 Removing beforeCountValue counts less than 10 Removing duringCountValue counts less than 10 Removing afterCountValue counts less than 10 Removing caseCountValue counts less than 10 Removing nonCaseCountValue counts less than 10 Removing countValue counts less than 10 Initiating cluster consisting only of main thread Constructing features on server Fetching data from server Fetching data took 0.17 secs Constructing features on server Fetching data from server Fetching data took 0.494 secs Constructing features on server Fetching data from server Fetching data took 0.231 secs Constructing during cohort covariates Constructing features on server Fetching data from server Fetching data took 0.399 secs Constructing features on server Fetching data from server Fetching data took 0.531 secs Constructing features on server Fetching data from server Fetching data took 0.169 secs Constructing during cohort covariates Constructing features on server Fetching data from server Fetching data took 0.58 secs Censoring numExposureEras counts less than 1e+06 Censoring numPersonsExposed counts less than 1e+06 Censoring numCases counts less than 1e+06 Censoring/removing dechallengeAttempt counts less than 1e+06 Censoring/removing DECHALLENGE FAIL or SUCCESS counts less than 1e+06 Censoring/removing rechallenge_attempt counts less than 1e+06 Censoring/removing rechallenge_fail or rechallenge_success counts less than 1e+06 Removing countValue counts less than 1e+06 Removing sumValue counts less than 1e+06 Removing numEvents less than 1e+06 Constructing features on server Fetching data from server Fetching data took 0.494 secs Constructing features on server Fetching data from server Fetching data took 0.406 secs Constructing features on server Fetching data from server Fetching data took 0.496 secs Creating characterization results tables Migrating data set Migrator using SQL files in Characterization Creating migrations table Migrations table created Executing migration: Migration_1-v3_0_0_store_version.sql Saving migration: Migration_1-v3_0_0_store_version.sql Migration complete Migration_1-v3_0_0_store_version.sql Closing database connection Updating version number - Preparing to upload rows 1 through 102 - Preparing to upload rows 1 through 3 - Preparing to upload rows 1 through 3 - Preparing to upload rows 1 through 6 - Preparing to upload rows 1 through 3 - Preparing to upload rows 1 through 1 - Preparing to upload rows 1 through 3 - Preparing to upload rows 1 through 1 - Preparing to upload rows 1 through 3 Uploading data took 18.1 secs [ FAIL 0 | WARN 1 | SKIP 8 | PASS 452 ] ══ Skipped tests (8) ═══════════════════════════════════════════════════════════ • empty test (1): 'test-manualData.R:377:1' • not run locally (7): 'test-dbs.R:163:5', 'test-dbs.R:163:5', 'test-dbs.R:163:5', 'test-dbs.R:163:5', 'test-dbs.R:163:5', 'test-dbs.R:163:5', 'test-dbs.R:163:5' [ FAIL 0 | WARN 1 | SKIP 8 | PASS 452 ] Warning message: call dbDisconnect() when finished working with a connection > > proc.time() user system elapsed 101.93 37.59 128.07