* using log directory ‘/home/hornik/tmp/CRAN_special_donttest/Certara.RsNLME.Rcheck’ * using R Under development (unstable) (2025-09-01 r88761) * using platform: x86_64-pc-linux-gnu * R was compiled by gcc-15 (Debian 15.2.0-1) 15.2.0 GNU Fortran (Debian 15.2.0-1) 15.2.0 * running under: Debian GNU/Linux forky/sid * using session charset: UTF-8 * using option ‘--run-donttest’ * checking for file ‘Certara.RsNLME/DESCRIPTION’ ... OK * this is package ‘Certara.RsNLME’ version ‘3.1.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [9s/9s] OK * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘Certara.RsNLME’ can be installed ... [20s/20s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [38s/38s] OK * checking Rd files ... [1s/1s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [1s/1s] ERROR Running examples in ‘Certara.RsNLME-Ex.R’ failed The error most likely occurred in: > base::assign(".ptime", proc.time(), pos = "CheckExEnv") > ### Name: NlmeVpcParams-class > ### Title: Arguments for VPC runs > ### Aliases: NlmeVpcParams-class NlmeVpcParams > ### Keywords: internal > > ### ** Examples > > ## No test: > model <- pkmodel( + parameterization = "Clearance", + numCompartments = 2, + data = pkData, + ID = "Subject", + Time = "Act_Time", + A1 = "Amount", + CObs = "Conc", + workingDir = tempdir() + ) > > # Define the host > host <- hostParams(parallelMethod = "NONE", + hostName = "local", + numCores = 1, + sharedDirectory = tempdir()) > job <- fitmodel(model, + hostPlatform = host) Warning in Certara.NLME8::checkInstallDir(installdir) : File(s) TDL5, libNLME7_linux.a, libNLME7_FORT_linux.a, libMPI_STUB_linux.a, libLAPACK_linux.a, libBLAS_linux.a, libcrlibm_linux.a, cadlicensingtool, execNLMECmd.sh, libcadlicensingclient.so. not found in NLME installation directory provided: INSTALLDIR= Error in createModelInfo(model = model) : Cannot create the modelinfo file, NLME executables not found Calls: fitmodel ... .load_engineParams -> -> createModelInfo Execution halted * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [5s/5s] OK Running ‘testthat.R’ [5s/5s] * checking PDF version of manual ... [12s/12s] OK * checking HTML version of manual ... [4s/5s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR