* using log directory ‘/srv/hornik/tmp/CRAN_pretest/Certara.RsNLME.Rcheck’ * using R Under development (unstable) (2024-10-20 r87250) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.1 (1) Debian flang-new version 19.1.1 (1) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘Certara.RsNLME/DESCRIPTION’ ... OK * this is package ‘Certara.RsNLME’ version ‘3.0.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/5s] NOTE Maintainer: ‘James Craig ’ New submission Possibly misspelled words in DESCRIPTION: Certara's (12:83) NLME (12:62, 13:5) Pharmacodynamic (11:63) Pharmacokinetic (11:38) Pharmacometric (2:8) Found the following (possibly) invalid URLs: URL: https://certara.com/training/ From: man/pkData.Rd Status: 403 Message: Forbidden URL: https://www.certara.com/software/r-speaks-nlme-rsnlme/ From: README.md Status: 403 Message: Forbidden * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘Certara.RsNLME’ can be installed ... [9s/9s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [17s/17s] OK * checking Rd files ... [1s/1s] NOTE checkRd: (-1) pkemaxmodel.Rd:99-100: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkemaxmodel.Rd:100-101: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkemaxmodel.Rd:109-110: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkemaxmodel.Rd:111-112: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkemaxmodel.Rd:115-117: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkemaxmodel.Rd:118-119: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:100-101: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:101-102: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:110-111: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:112-113: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:116-118: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel.Rd:119-120: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:60-61: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:61-62: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:73-74: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:75-76: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:80-82: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkindirectmodel_MappingParameters.Rd:83-84: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:91-92: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:92-93: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:101-102: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:103-104: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:107-109: Lost braces in \itemize; meant \describe ? checkRd: (-1) pklinearmodel.Rd:110-111: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:76-77: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:77-78: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:86-87: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:88-89: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:92-94: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel.Rd:95-96: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:34-35: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:35-36: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:47-48: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:49-50: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:54-56: Lost braces in \itemize; meant \describe ? checkRd: (-1) pkmodel_MappingParameters.Rd:57-58: Lost braces in \itemize; meant \describe ? checkRd: (-1) structuralParameter.Rd:30-31: Lost braces in \itemize; meant \describe ? checkRd: (-1) structuralParameter.Rd:32-33: Lost braces in \itemize; meant \describe ? checkRd: (-1) structuralParameter.Rd:34-35: Lost braces in \itemize; meant \describe ? checkRd: (-1) structuralParameter.Rd:36-37: Lost braces in \itemize; meant \describe ? checkRd: (-1) structuralParameter.Rd:38-39: Lost braces in \itemize; meant \describe ? * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [4s/4s] OK * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [2s/2s] OK Running ‘testthat.R’ [1s/1s] * checking PDF version of manual ... [5s/5s] OK * checking HTML version of manual ... [3s/3s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 NOTEs