R Under development (unstable) (2025-02-18 r87748 ucrt) -- "Unsuffered Consequences"
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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(Certara.RDarwin)
> 
> test_check("Certara.RDarwin")
stparm(Cl = tvCl * exp( nCl  + (Period==1)*nClPeriodx1 + (Period==2)*nClPeriodx2 ))
	fixef(tvCl= c(, 1, ))
	ranef(diag(nCl) = c(1))
	ranef(diag(nClPeriodx1) = c(1) , same(nClPeriodx2)) 
stparm(Cl = tvCl * exp( nCl  + (Period==1)*nClPeriodPeriodx1 + (Period==2)*nClPeriodPeriodx2 ))
	fixef(tvCl= c(, 1, ))
	ranef(diag(nCl) = c(1))
	ranef(diag(nClPeriodPeriodx1) = c(1) , same(nClPeriodPeriodx2)) 
stparm(Cl = tvCl  * exp((Race==2)*dCldRace2) * exp((Race==3)*dCldRace3) * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	
	fixef(dCldRace2= c(, 0, ))
	fixef(dCldRace3= c(, 0, ))
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl  * exp((Race==2)*dCldRace2) * exp((Race==3)*dCldRace3) * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	
	fixef(dCldRace2= c(, 0, ))
	fixef(dCldRace3= c(, 0, ))
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl {Cl_Race[1]} * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	{Cl_Race[2]}
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl {Cl_Race[1]} * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	{Cl_Race[2]}
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl  * (WT/median(WT))^dCldWT * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	fixef(dCldWT= c(, 0, ))
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl  * (WT/median(WT))^dCldWT * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	fixef(dCldWT= c(, 0, ))
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl {Cl_WT[1]} * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	{Cl_WT[2]}
	ranef(diag(nCl) = c(1)) 
stparm(Cl = tvCl {Cl_WT[1]} * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	{Cl_WT[2]}
	ranef(diag(nCl) = c(1)) 
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokens.json
PK1IVC 
 test() {
	cfMicro(A1, Cl / V)
	C = A1 / V
	dosepoint(A1, idosevar = A1Dose, infdosevar = A1InfDose, infratevar = A1InfRate)
	error(CEps = 0.1)
	observe(CObs = C * (1 + CEps))
	fcovariate(WT)
	stparm(Cl = tvCl  * WT^dCldWT * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	fixef(dCldWT= c(, 0, ))
	ranef(diag(nCl) = c(1))
	stparm(V = tvV * exp( nV ))
	fixef(tvV= c(, 1, ))
	ranef(diag(nV) = c(1))

} 
PK2IVC 
 test() {
	cfMicro(A1, Cl / V, Cl2 / V, Cl2 / V2)
C = A1 / V
	dosepoint(A1, idosevar = A1Dose, infdosevar = A1InfDose, infratevar = A1InfRate)
	error(CEps = 0.1)
	observe(CObs = C * (1 + CEps))
	fcovariate(WT)
	stparm(Cl = tvCl  * WT^dCldWT * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	fixef(dCldWT= c(, 0, ))
	ranef(diag(nCl) = c(1))
	stparm(V = tvV * exp( nV ))
	fixef(tvV= c(, 1, ))
	ranef(diag(nV) = c(1))
	stparm(Cl2 = tvCl2  * WT^dCl2dWT * exp( nCl2 ))
	fixef(tvCl2= c(, 1, ))
	fixef(dCl2dWT= c(, 0, ))
	ranef(diag(nCl2) = c(1))
	stparm(V2 = tvV2  * WT^dV2dWT * exp( nV2 ))
	fixef(tvV2= c(, 1, ))
	fixef(dV2dWT= c(, 0, ))
	ranef(diag(nV2) = c(1))

} 
PK3IVC 
 test() {
	cfMicro(A1, Cl / V, Cl2 / V, Cl2 / V2, Cl3 / V, Cl3 / V3)
	C = A1 / V
	dosepoint(A1, idosevar = A1Dose, infdosevar = A1InfDose, infratevar = A1InfRate)
	error(CEps = 0.1)
	observe(CObs = C * (1 + CEps))
	fcovariate(WT)
	stparm(Cl = tvCl  * WT^dCldWT * exp( nCl ))
	fixef(tvCl= c(, 1, ))
	fixef(dCldWT= c(, 0, ))
	ranef(diag(nCl) = c(1))
	stparm(V = tvV * exp( nV ))
	fixef(tvV= c(, 1, ))
	ranef(diag(nV) = c(1))
	stparm(Cl2 = tvCl2  * WT^dCl2dWT * exp( nCl2 ))
	fixef(tvCl2= c(, 1, ))
	fixef(dCl2dWT= c(, 0, ))
	ranef(diag(nCl2) = c(1))
	stparm(V2 = tvV2  * WT^dV2dWT * exp( nV2 ))
	fixef(tvV2= c(, 1, ))
	fixef(dV2dWT= c(, 0, ))
	ranef(diag(nV2) = c(1))
	stparm(Cl3 = tvCl3  * WT^dCl3dWT * exp( nCl3 ))
	fixef(tvCl3= c(, 1, ))
	fixef(dCl3dWT= c(, 0, ))
	ranef(diag(nCl3) = c(1))
	stparm(V3 = tvV3  * WT^dV3dWT * exp( nV3 ))
	fixef(tvV3= c(, 1, ))
	fixef(dV3dWT= c(, 0, ))
	ranef(diag(nV3) = c(1))

} 
Both EstArgs and SimArgs are not specified. Default EstArgs will be used.
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensTlagDuration.json
For a space named Custom1 the main dosepoint is set to Aa
Both EstArgs and SimArgs are not specified. Default EstArgs will be used.
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensCustom.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensTlagDuration.json
Both EstArgs and SimArgs are not specified. Default EstArgs will be used.
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensSex.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensZOGIGW.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensMixRatio.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensCovs.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/templateEllipsis.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensEllipsis.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/templateEllipsis.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokensEllipsis.json
information stored in D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/template.txt and D:\temp\2025_02_20_18_40_17_15335\RtmpEbIa1b/tokens.json
Cannot remove nCl ranef statement from l425 model since it is presented not in isolated form.
[ FAIL 0 | WARN 0 | SKIP 43 | PASS 43 ]

══ Skipped tests (43) ══════════════════════════════════════════════════════════
• On CRAN (43): 'test-2CatCovSearched.R:89:3', 'test-3CatCovSearched.R:123:3',
  'test-CatCovMultRelationsSearched.R:137:3', 'test-ContCovSearched.R:124:3',
  'test-Dosepoint.R:11:3', 'test-StParm.R:86:5',
  'test-THETAD1_1_ETAD1_2.R:105:3', 'test-THETAD1_2_ETAD1_1.R:110:3',
  'test-THETAD1_2_ETAD1_2.R:146:3', 'test-THETAR1_1_BW_2.R:131:3',
  'test-THETAR1_1_ETAR1_1.R:115:3', 'test-THETAR_Frozen_ETA_Frozen.R:134:3',
  'test-Table.R:48:3', 'test-add_Covariate.R:23:3',
  'test-add_Covariate.R:76:3', 'test-add_StParm.R:31:3',
  'test-create_CustomSpace.R:22:13', 'test-create_CustomSpace.R:79:13',
  'test-gen_InputRow1.R:4:3', 'test-gen_InputRow1.R:11:3',
  'test-gen_InputRow1.R:16:3', 'test-gen_InputRow1.R:21:3',
  'test-gen_MAP.R:46:13', 'test-gen_MAPCustom.R:74:13',
  'test-get_PMLParametersSets.R:64:13', 'test-get_PMLParametersSets.R:137:13',
  'test-get_PMLParametersSets.R:189:13', 'test-get_PMLParametersSets.R:243:13',
  'test-get_PMLParametersSets.R:339:13', 'test-get_PMLParametersSets.R:441:13',
  'test-get_PMLParametersSets.R:579:13', 'test-modify_Omega.R:7:3',
  'test-modify_StParmCustom.R:25:13', 'test-pyDarwinOptions.R:14:3',
  'test-pyDarwinOptions.R:25:3', 'test-pyDarwinOptions.R:36:3',
  'test-pyDarwinOptions.R:47:3', 'test-pyDarwinOptions.R:58:3',
  'test-pyDarwinOptions.R:154:3', 'test-specify_EngineParams.R:19:3',
  'test-specify_EngineParams.R:27:3', 'test-specify_SimParams.R:13:3',
  'test-specify_SimParams.R:21:3'

[ FAIL 0 | WARN 0 | SKIP 43 | PASS 43 ]
Deleting unused snapshots:
• 2CatCovSearched/template.txt
• 2CatCovSearched/tokens.json
• 3CatCovSearched/template.txt
• 3CatCovSearched/tokens.json
• CatCovMultRelationsSearched/template.txt
• CatCovMultRelationsSearched/tokens.json
• ContCovSearched/template.txt
• ContCovSearched/tokens.json
• THETAD1_1_ETAD1_2/template.txt
• THETAD1_1_ETAD1_2/tokens.json
• THETAD1_2_ETAD1_1/template.txt
• THETAD1_2_ETAD1_1/tokens.json
• THETAD1_2_ETAD1_2/template.txt
• THETAD1_2_ETAD1_2/tokens.json
• THETAR1_1_BW_2/template.txt
• THETAR1_1_BW_2/tokens.json
• THETAR1_1_ETAR1_1/template.txt
• THETAR1_1_ETAR1_1/tokens.json
• THETAR_Frozen_ETA_Frozen/template.txt
• THETAR_Frozen_ETA_Frozen/tokens.json
• pyDarwinOptions/temp.json
> 
> proc.time()
   user  system elapsed 
   5.32    0.46    5.79