context("Testing helper functions.") testthat::skip_on_cran() testthat::test_that( desc = "perm permutations_function", code = { CausalQueries:::perm(3) expect_true(nrow(CausalQueries:::perm(3)) == 4) expect_true(sum(CausalQueries:::perm(2:3)) == 30) } ) testthat::test_that( desc = "st_within: Removing consecutive brackets", code = { # tests for remove b <- "(XXX[[Y=0]] == 1 + XXX[[Y=1]] == 0)" expect_equal(st_within(b), c("XXX", "XXX")) expect_error(st_within(3)) } ) testthat::test_that( desc = "gsub_many: multiple substitutions", code = { expect_true(CausalQueries:::gsub_many("abc", "a", "b") == "bbc") expect_true(CausalQueries:::gsub_many("abc", c("ab", "c"), c("o", "k")) == "ok") } ) testthat::test_that( desc = "gsub_many: error", expect_error(CausalQueries:::gsub_many("abc", c("ab", "c"), c("o"))) ) testthat::test_that( desc = "clean_condition: spacing strings", code = { expect_true(CausalQueries:::clean_condition("01") == "0 1") } ) testthat::test_that( desc = "interpret_type", code = { model <- make_model('R -> X; Z -> X; X -> Y') a1 <- CausalQueries:::interpret_type(model, position = list(X = c(3,4), Y = 1)) a2 <- CausalQueries:::interpret_type(model, condition = c('X | Z=0 & R=1', 'X | Z=0 & R=0')) expect_true(all(dim(a1[[2]]) == c(1,4))) expect_true(all(dim(a2[[1]]) == c(2,4))) # both defined expect_error(interpret_type(model, condition = c('X | Z=0 & R=1', 'X | Z=0 & R=0'), position = list(X = c(3,4), Y = 1))) # not in types expect_error(CausalQueries:::interpret_type(model, position = list(Q = c(3,5), Y = 1))) } ) testthat::test_that( desc = "expand_wildcard", code = { expect_message(expand_wildcard("Y[X=1, M=.] ==1")) a <- expand_wildcard('(Y[X=1, M=1] > Y[X=1, M=0])')== "(Y[X=1, M=1] > Y[X=1, M=0])" expect_true(a) a <- expand_wildcard('(Y[X=1, M=.] > Y[X=1, M=.])', verbose = FALSE) expect_true(a[[1]] == "(Y[X=1, M=0] > Y[X=1, M=0] | Y[X=1, M=1] > Y[X=1, M=1])") a2 <- expand_wildcard('(Y[X=1, M=.] > Y[X=1, M=.])', join_by = "&", verbose = TRUE) expect_true(a2[[1]] == "(Y[X=1, M=0] > Y[X=1, M=0] & Y[X=1, M=1] > Y[X=1, M=1])") a2 <- expand_wildcard('(Y[X=.]==1 & Y[X=.]==0)', join_by = "&", verbose = TRUE) expect_true(a2[[1]] == "(Y[X=0]==1 & Y[X=0]==0 & Y[X=1]==1 & Y[X=1]==0)") out <- capture.output(expand_wildcard('(Y[X=.]==1)', join_by = NULL, verbose = TRUE)) expect_equal(sum(grepl("\\(Y\\[X=.\\]==1\\)", out)), 3) } ) testthat::test_that( desc = "get_parameter_names", code = { out <- get_parameter_names(make_model('X->Y'), include_paramset = FALSE) expect_true(all(!grepl("X|Y", out))) } ) testthat::test_that( desc = "include_vars", code = { model <- make_model("X->Y") expect_true(CausalQueries:::includes_var("X", "X==1")) expect_true(!(CausalQueries:::includes_var("Y", "X==1"))) a <- CausalQueries:::var_in_query(model, "X==1") expect_true(a == "X") } )