downloading reverse dependencies ... downloading SelectBoost_2.2.2.tar.gz ... ok installing dependencies ‘Cascade’, ‘CascadeData’, ‘msgps’, ‘tnet’, ‘varbvs’ begin installing package ‘tnet’ begin installing package ‘CascadeData’ begin installing package ‘msgps’ begin installing package ‘varbvs’ * installing *source* package ‘CascadeData’ ... ** this is package ‘CascadeData’ version ‘1.4’ ** package ‘CascadeData’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (CascadeData) * installing *source* package ‘msgps’ ... ** this is package ‘msgps’ version ‘1.3.5’ ** package ‘msgps’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmpff2Pnd/R.INSTALL923598a0c7d3/msgps/src' gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c GPS_v3.2.c -o GPS_v3.2.o GPS_v3.2.c: In function ‘gps’: GPS_v3.2.c:71:13: warning: variable ‘flag_St’ set but not used [-Wunused-but-set-variable] 71 | int flag_St; | ^~~~~~~ GPS_v3.2.c: In function ‘cvgps’: GPS_v3.2.c:433:13: warning: variable ‘flag_St’ set but not used [-Wunused-but-set-variable] 433 | int flag_St; | ^~~~~~~ GPS_v3.2.c: In function ‘DFMODIFIED2’: GPS_v3.2.c:1195:13: warning: variable ‘flag_BtBt0’ set but not used [-Wunused-but-set-variable] 1195 | int flag_BtBt0; | ^~~~~~~~~~ GPS_v3.2.c: In function ‘gps’: GPS_v3.2.c:362:107: warning: ‘temp’ may be used uninitialized [-Wmaybe-uninitialized] 362 | REAL(tuning_stand)[step0] = REAL(tuning_stand)[step0-1] + REAL(ex_standardize_vec)[jstar] * temp; | ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~ GPS_v3.2.c:93:16: note: ‘temp’ was declared here 93 | double temp; | ^~~~ gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c registerDynamicSymbol.c -o registerDynamicSymbol.o gcc-14 -std=gnu23 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o msgps.so GPS_v3.2.o registerDynamicSymbol.o -llapack -L/home/hornik/tmp/R/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmpff2Pnd/R.INSTALL923598a0c7d3/msgps/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-msgps/00new/msgps/libs ** R ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (msgps) * installing *source* package ‘tnet’ ... ** this is package ‘tnet’ version ‘3.0.16’ ** package ‘tnet’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tnet) begin installing package ‘Cascade’ * installing *source* package ‘varbvs’ ... ** this is package ‘varbvs’ version ‘2.6-10’ ** package ‘varbvs’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-14 (Debian 14.2.0-19) 14.2.0’ using C++ compiler: ‘g++-14 (Debian 14.2.0-19) 14.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/Rtmppr6hs3/R.INSTALL92358600f9bfa/varbvs/src' g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c RcppExports.cpp -o RcppExports.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c diagsq.c -o diagsq.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c diagsqr.c -o diagsqr.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c misc.c -o misc.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c varbvs.c -o varbvs.o g++-14 -std=gnu++17 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -pedantic -mtune=native -c varbvsnormupdate_rcpp.cpp -o varbvsnormupdate_rcpp.o gcc-14 -std=gnu23 -I"/home/hornik/tmp/R/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c varbvsr.c -o varbvsr.o g++-14 -std=gnu++17 -shared -L/home/hornik/tmp/R/lib -Wl,-O1 -o varbvs.so RcppExports.o diagsq.o diagsqr.o init.o misc.o varbvs.o varbvsnormupdate_rcpp.o varbvsr.o -L/home/hornik/tmp/R/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/Rtmppr6hs3/R.INSTALL92358600f9bfa/varbvs/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-varbvs/00new/varbvs/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (varbvs) * installing *source* package ‘Cascade’ ... ** this is package ‘Cascade’ version ‘2.2’ ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (Cascade) checking Cascade_2.2.tar.gz ... checking SelectBoost_2.2.2.tar.gz ... Depends: Package: Cascade Depends: R (>= 3.5.0) Imports: abind, animation, cluster, grid, igraph, lars, lattice, limma, magic, methods, nnls, splines, stats4, survival, tnet, VGAM Timings: user system elapsed Cascade 65.115 7.225 77.815 Results: Check status summary: OK Source packages 1 Reverse depends 1 Check results summary: Cascade ... OK rdepends_SelectBoost ... OK Check results changes: Package: SelectBoost Check: CRAN incoming feasibility Old result: NOTE