* installing *source* package 'COveR' ... ** using staged installation ********************************************** WARNING: this package has a configure script It probably needs manual configuration ********************************************** ** libs using C compiler: 'gcc.exe (GCC) 13.3.0' gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/R_icmeans.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/R_icmeans.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/dists/ic_hausdorff.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/dists/ic_hausdorff.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/dists/ic_euclid.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/dists/ic_euclid.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/icmeans.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/icmeans.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r2okm/r2okm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r2okm/r2okm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r2okm/R_r2okm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r2okm/R_r2okm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/neokm/neokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/neokm/neokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/neokm/R_neokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/neokm/R_neokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r1okm/r1okm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r1okm/r1okm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r1okm/R_r1okm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/r1okm/R_r1okm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_mean.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_mean.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_join.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_join.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_meet.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_meet.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_sum.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_sum.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_hausdorff.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_hausdorff.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_euclid.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_euclid.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_mean.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_mean.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_sum.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_sum.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_join.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_join.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_meet.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_meet.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/iokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/iokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/R_iokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/R_iokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/helpers.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/helpers.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/COveR-init.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/COveR-init.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/interval.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/interval.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/dists/ik_euclid.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/dists/ik_euclid.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/dists/ik_hausdorff.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/dists/ik_hausdorff.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/ikmeans.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/ikmeans.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/R_ikmeans.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ikmeans/R_ikmeans.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ineokm/ineokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ineokm/ineokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ineokm/R_ineokm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/ineokm/R_ineokm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/okm/okm.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/okm/okm.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools44/x86_64-w64-mingw32.static.posix/include" -I/include -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/distance.c -o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/distance.o gcc -shared -s -static-libgcc -o COveR.dll tmp.def /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/R_icmeans.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/icmeans/dists/ic_hausdorff.o 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/d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_meet.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/hausdorff/io_hausdorff_sum.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_hausdorff.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/io_euclid.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_mean.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_sum.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_join.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/dists/euclid/io_euclid_meet.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/iokm/iokm.o 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/d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/okm/okm.o /d/temp/2024_11_13_12_10_02_23053/RtmpGgxSfs/R.INSTALL9f604d0231fa/COveR/src/distance.o -L/lib -lgsl -lgslcblas -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools44/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-COveR/00new/COveR/libs/x64 ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (COveR)