R Under development (unstable) (2024-03-25 r86192 ucrt) -- "Unsuffered Consequences"
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Platform: x86_64-w64-mingw32/x64

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> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/tests.html
> # * https://testthat.r-lib.org/reference/test_package.html#special-files
> 
> library(testthat)
> library(CDMConnector)
> 
> test_check("CDMConnector")
trying URL 'https://example-data.ohdsi.dev/GiBleed.zip'
Content type 'application/zip' length 6754786 bytes (6.4 MB)
==================================================
downloaded 6.4 MB


Download completed!
Creating CDM database D:\temp\Rtmp8iAONu\file17a84558344b4/GiBleed_5.3.zip
[ FAIL 6 | WARN 0 | SKIP 19 | PASS 225 ]

══ Skipped tests (19) ══════════════════════════════════════════════════════════
• Capr cannot be loaded (1): 'test-db-generateCohortSet.R:77:3'
• CirceR cannot be loaded (9): 'test-db-custom_cohort_creation.R:42:5',
  'test-db-generateCohortSet.R:64:5', 'test-db-generateCohortSet.R:210:3',
  'test-db-generateConceptCohortSet.R:303:5', 'test-db-generic-bind.R:22:5',
  'test-db-newGeneratedCohortSet.R:126:3',
  'test-db-newGeneratedCohortSet.R:179:3',
  'test-db-recordCohortAttrition.R:133:3',
  'test-write_prefix_cohort_generation_snowflake.R:3:3'
• TreatmentPatterns cannot be loaded (1): 'test-db-generateCohortSet.R:127:3'
• arrow cannot be loaded (1): 'test-local_cdm.R:3:3'
• eunomia_is_available("empty_cdm") is not TRUE (1): 'test-Eunomia.R:42:3'
• failing test (1): 'test-db-dateadd.R:126:3'
• manual test (5): 'test-Eunomia.R:2:3', 'test-db-copy_cdm_to.R:62:3',
  'test-db-generateCohortSet.R:108:3', 'test-db-generateCohortSet.R:243:3',
  'test-db-write_schema_with_database.R:5:3'

══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-db-generateConceptCohortSet.R:323:5'): missing domains produce warning ──
Error in `.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)`: invalid non-character version specification 'x' (type: double)
Backtrace:
     ▆
  1. ├─testthat::expect_warning(...) at test-db-generateConceptCohortSet.R:322:3
  2. │ └─testthat:::expect_condition_matching(...)
  3. │   └─testthat:::quasi_capture(...)
  4. │     ├─testthat (local) .capture(...)
  5. │     │ └─base::withCallingHandlers(...)
  6. │     └─rlang::eval_bare(quo_get_expr(.quo), quo_get_env(.quo))
  7. └─CDMConnector::generateConceptCohortSet(...) at test-db-generateConceptCohortSet.R:323:5
  8.   └─base::Ops.numeric_version(...)
  9.     └─base::as.numeric_version(e2)
 10.       └─base::numeric_version(x)
 11.         └─base::.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)
── Failure ('test-db-generateConceptCohortSet.R:343:5'): Regimen domain does not cause error ──
Expected `{ ... }` to run without any errors.
i Actually got a <simpleError> with text:
  invalid non-character version specification 'x' (type: double)
── Failure ('test-db-generateConceptCohortSet.R:349:3'): Regimen domain does not cause error ──
cdm$cohort is not an S3 object
── Failure ('test-db-generateConceptCohortSet.R:367:2'): Eunomia ───────────────
Expected `... <- NULL` to run without any errors.
i Actually got a <simpleError> with text:
  invalid non-character version specification 'x' (type: double)
── Error ('test-db-recordCohortAttrition.R:127:5'): duckdb - recordCohortAttrition ──
Error in `.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)`: invalid non-character version specification 'x' (type: double)
Backtrace:
    ▆
 1. └─CDMConnector (local) test_record_cohort_attrition(con, cdm_schema, write_schema) at test-db-recordCohortAttrition.R:127:5
 2.   └─CDMConnector::generateConceptCohortSet(...) at test-db-recordCohortAttrition.R:9:3
 3.     └─base::Ops.numeric_version(...)
 4.       └─base::as.numeric_version(e2)
 5.         └─base::numeric_version(x)
 6.           └─base::.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)
── Error ('test-memory-issue.R:14:3'): memory leak does not happen ─────────────
Error in `.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)`: invalid non-character version specification 'x' (type: double)
Backtrace:
    ▆
 1. └─CDMConnector::generateConceptCohortSet(...) at test-memory-issue.R:14:3
 2.   └─base::Ops.numeric_version(...)
 3.     └─base::as.numeric_version(e2)
 4.       └─base::numeric_version(x)
 5.         └─base::.make_numeric_version(x, strict, .standard_regexps()$valid_numeric_version)

[ FAIL 6 | WARN 0 | SKIP 19 | PASS 225 ]
Error: Test failures
In addition: There were 11 warnings (use warnings() to see them)
Execution halted
Warning message:
Database is garbage-collected, use dbDisconnect(con, shutdown=TRUE) or duckdb::duckdb_shutdown(drv) to avoid this.