* installing *source* package 'BoltzMM' ...
** this is package 'BoltzMM' version '0.1.5'
** using staged installation
** libs
using C++ compiler: 'g++.exe (GCC) 14.2.0'
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c BoltzMM.cpp -o BoltzMM.o
BoltzMM.cpp:10:9: warning: "NDEBUG" redefined
   10 | #define NDEBUG
      |         ^~~~~~
<command-line>: note: this is the location of the previous definition
BoltzMM.cpp: In function 'double log_pl_calc(arma::mat, Rcpp::List)':
BoltzMM.cpp:68:10: warning: comparison of integer expressions of different signedness: 'int' and 'const arma::uword' {aka 'const unsigned int'} [-Wsign-compare]
   68 |   if(p+q != data.n_cols){
      |      ~~~~^~~~~~~~~~~~~~
BoltzMM.cpp: In function 'double pfvbm(arma::vec, arma::vec, arma::mat)':
BoltzMM.cpp:159:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  159 |     if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |        ~~~~~~~~~~~^~~~
BoltzMM.cpp:159:38: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  159 |     if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |                           ~~~~~~~~~~~^~~
BoltzMM.cpp:159:56: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  159 |     if(xval.n_elem!= n || Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |                                             ~~~~~~~~~~~^~~
BoltzMM.cpp: In function 'arma::rowvec allpfvbm(arma::vec, arma::mat)':
BoltzMM.cpp:193:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  193 |     if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |        ~~~~~~~~~~~^~~
BoltzMM.cpp:193:37: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  193 |     if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |                          ~~~~~~~~~~~^~~
BoltzMM.cpp: In function 'arma::mat rfvbm(int, arma::vec, arma::mat)':
BoltzMM.cpp:228:17: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  228 |   if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |      ~~~~~~~~~~~^~~
BoltzMM.cpp:228:35: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  228 |   if(Mmat.n_rows!=n || Mmat.n_cols!=n || Mmat.n_rows!=Mmat.n_cols ){
      |                        ~~~~~~~~~~~^~~
BoltzMM.cpp: In function 'Rcpp::List fitfvbm(arma::mat, arma::vec, arma::mat, double, int)':
BoltzMM.cpp:270:19: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  270 |     if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){
      |        ~~~~~~~~~~~^~~
BoltzMM.cpp:270:37: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  270 |     if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){
      |                          ~~~~~~~~~~~^~~
BoltzMM.cpp:270:56: warning: comparison of integer expressions of different signedness: 'const arma::uword' {aka 'const unsigned int'} and 'int' [-Wsign-compare]
  270 |     if(Mmat.n_rows!=D || Mmat.n_cols!=D || data.n_cols !=D || data.n_cols!=Mmat.n_cols || data.n_cols!=Mmat.n_rows || Mmat.n_rows!=Mmat.n_cols){
      |                                            ~~~~~~~~~~~~^~~
g++ -std=gnu++17  -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include' -I'D:/RCompile/CRANpkg/lib/4.6/BH/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -pedantic -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17 -shared -s -static-libgcc -o BoltzMM.dll tmp.def BoltzMM.o RcppExports.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-BoltzMM/00new/BoltzMM/libs/x64
** R
** data
*** moving datasets to lazyload DB
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BoltzMM)