* using log directory ‘/srv/hornik/tmp/CRAN_pretest/BinMat.Rcheck’ * using R Under development (unstable) (2025-05-01 r88184) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3) Debian flang-new version 19.1.7 (3) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘BinMat/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘BinMat’ version ‘0.1.5’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/10s] WARNING Maintainer: ‘Clarke van Steenderen ’ Insufficient package version (submitted: 0.1.5, existing: 0.1.5) Found the following (possibly) invalid URLs: URL: https://www.sciencedirect.com/science/article/pii/S1049964420306538 From: inst/doc/BinMat.html Status: 403 Message: Forbidden Please use DOIs for the following publisher URLs: https://www.sciencedirect.com/science/article/pii/S1049964420306538 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘BinMat’ can be installed ... [1s/1s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [0s/0s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [0s/0s] OK * checking loading without being on the library search path ... [0s/0s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [2s/2s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... NOTE Rd file 'nymphaea.Rd': \examples lines wider than 100 characters: colrs = c("dodgerblue", "black", "red", "green3", "orange", "darkblue", "gold2", "darkgreen", "darkred", "grey", "darkgrey", "magenta", ... [TRUNCATED] nmds(nymph, labs = FALSE, include_ellipse = FALSE, colours = colrs, legend_pos = "right", pt_size = 2) These lines will be truncated in the PDF manual. * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [3s/3s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [4s/4s] OK * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 WARNING, 1 NOTE