* installing *source* package ‘BigDataStatMeth’ ... ** this is package ‘BigDataStatMeth’ version ‘2.0.0’ ** using staged installation zlib 1.3.2 is available ok R CMD SHLIB supports OpenMP without any extra hint ** libs specified C++17 using C++ compiler: ‘Debian clang version 21.1.8 (7+b1)’ using C++17 clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c RcppExports.cpp -o RcppExports.o In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from RcppExports.cpp:4: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ 5 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_applyFunction.cpp -o hdf5_applyFunction.o In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_applyFunction.cpp:26: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_createGroup.cpp -o hdf5_createGroup.o In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_createGroup.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_createMatrix.cpp -o hdf5_createMatrix.o In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_createMatrix.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_getDatasetList.cpp -o hdf5_getDatasetList.o In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_getDatasetList.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_importFile.cpp -o hdf5_importFile.o In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_importFile.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_moveDataset.cpp -o hdf5_moveDataset.o In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_moveDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_pseudoinverse.cpp -o hdf5_pseudoinverse.o In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_pseudoinverse.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_aggregations.cpp -o hdf5_r6_aggregations.o In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_aggregations.cpp:47: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_arithmetic.cpp -o hdf5_r6_arithmetic.o In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_arithmetic.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_bind.cpp -o hdf5_r6_bind.o In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_bind.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_cholesky.cpp -o hdf5_r6_cholesky.o In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_cholesky.cpp:20: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_correlation.cpp -o hdf5_r6_correlation.o In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_correlation.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_eigen.cpp -o hdf5_r6_eigen.o In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_eigen.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_matvec.cpp -o hdf5_r6_matvec.o In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_matvec.cpp:36: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_minimal.cpp -o hdf5_r6_minimal.o In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_minimal.cpp:32: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_multiply.cpp -o hdf5_r6_multiply.o In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_multiply.cpp:42: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_normalize.cpp -o hdf5_r6_normalize.o In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_normalize.cpp:15: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_omics.cpp -o hdf5_r6_omics.o In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_omics.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_pca.cpp -o hdf5_r6_pca.o In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_pca.cpp:25: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_pseudoinv.cpp -o hdf5_r6_pseudoinv.o In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_pseudoinv.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_qr.cpp -o hdf5_r6_qr.o In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_qr.cpp:29: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_reduce_apply.cpp -o hdf5_r6_reduce_apply.o In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_reduce_apply.cpp:21: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_sparse.cpp -o hdf5_r6_sparse.o In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_sparse.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_split.cpp -o hdf5_r6_split.o In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_split.cpp:16: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_subset.cpp -o hdf5_r6_subset.o In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_subset.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_svd.cpp -o hdf5_r6_svd.o In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_svd.cpp:18: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_r6_write.cpp -o hdf5_r6_write.o In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_r6_write.cpp:6: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_reduceDataset.cpp -o hdf5_reduceDataset.o In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_reduceDataset.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_systemInfo.cpp -o hdf5_systemInfo.o In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_systemInfo.cpp:7: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c hdf5_writeDimnames.cpp -o hdf5_writeDimnames.o In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from hdf5_writeDimnames.cpp:30: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_blockmult.cpp -o mem_blockmult.o In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_blockmult.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_blocksubstract.cpp -o mem_blocksubstract.o In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_blocksubstract.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_blocksum.cpp -o mem_blocksum.o In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_blocksum.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_correlation.cpp -o mem_correlation.o In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_correlation.cpp:13: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_crossprod.cpp -o mem_crossprod.o In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_crossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_scalarprod.cpp -o mem_scalarprod.o In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_scalarprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_tcrossprod.cpp -o mem_tcrossprod.o In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_tcrossprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-21/include" -DNDEBUG -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rcpp/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include' -I'/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -I../inst/include/ -g2 -DBOOST_NO_CONCEPT_CHECKING -DSTRICT_R_HEADERS -fpic -g -O3 -Wall -pedantic -c mem_weightprod.cpp -o mem_weightprod.o In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:26: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseCore:61: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseCore/TriangularSolver.h:273:13: warning: variable 'count' set but not used [-Wunused-but-set-variable] 273 | Index count = 0; | ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/Sparse:29: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/SparseLU:35: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:78:9: warning: variable 'nsuper_et_post' set but not used [-Wunused-but-set-variable] 78 | Index nsuper_et_post = 0; // Number of relaxed snodes in postordered etree | ^ /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/Eigen/src/SparseLU/SparseLU_heap_relax_snode.h:79:9: warning: variable 'nsuper_et' set but not used [-Wunused-but-set-variable] 79 | Index nsuper_et = 0; // Number of relaxed snodes in the original etree | ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:31: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/IterativeSolvers:46: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/IterativeSolvers/IDRS.h:72:10: warning: variable 'replacements' set but not used [-Wunused-but-set-variable] 72 | Index replacements = 0; | ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:40: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigen.h:25: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/RcppEigenForward.h:37: In file included from /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/SparseExtra:45: /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/RcppEigen/include/unsupported/Eigen/src/SparseExtra/MarketIO.h:246:7: warning: variable 'count' set but not used [-Wunused-but-set-variable] 246 | int count = 0; | ^ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:250: ../inst/include/hdf5Algebra/matrixAggregations.hpp:145:19: warning: unused variable 'nthreads' [-Wunused-variable] 145 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:223:19: warning: unused variable 'nthreads' [-Wunused-variable] 223 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:289:19: warning: unused variable 'nthreads' [-Wunused-variable] 289 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:353:19: warning: unused variable 'nthreads' [-Wunused-variable] 353 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:428:19: warning: unused variable 'nthreads' [-Wunused-variable] 428 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:527:19: warning: unused variable 'nthreads' [-Wunused-variable] 527 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:595:19: warning: unused variable 'nthreads' [-Wunused-variable] 595 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:660:19: warning: unused variable 'nthreads' [-Wunused-variable] 660 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:732:19: warning: unused variable 'nthreads' [-Wunused-variable] 732 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:810:19: warning: unused variable 'nthreads' [-Wunused-variable] 810 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:910:19: warning: unused variable 'nthreads' [-Wunused-variable] 910 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:997:19: warning: unused variable 'nthreads' [-Wunused-variable] 997 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1058:19: warning: unused variable 'nthreads' [-Wunused-variable] 1058 | const int nthreads = static_cast( | ^~~~~~~~ ../inst/include/hdf5Algebra/matrixAggregations.hpp:1128:19: warning: unused variable 'nthreads' [-Wunused-variable] 1128 | const int nthreads = static_cast( | ^~~~~~~~ In file included from mem_weightprod.cpp:1: In file included from ../inst/include/BigDataStatMeth.hpp:254: ../inst/include/hdf5Algebra/matrixSdMean.hpp:118:22: warning: variable 'i' set but not used [-Wunused-but-set-variable] 118 | for( hsize_t i=0; offset[1] < dims_out[1]; i++) | ^ ../inst/include/hdf5Algebra/matrixSdMean.hpp:208:21: warning: variable 'i' set but not used [-Wunused-but-set-variable] 208 | for(hsize_t i=0; offset[0] < dims_out[0]; i++) | ^ 21 warnings generated. clang++-21 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-21/lib -Wl,-O1 -o BigDataStatMeth.so RcppExports.o hdf5_applyFunction.o hdf5_createGroup.o hdf5_createMatrix.o hdf5_getDatasetList.o hdf5_importFile.o hdf5_moveDataset.o hdf5_pseudoinverse.o hdf5_r6_aggregations.o hdf5_r6_arithmetic.o hdf5_r6_bind.o hdf5_r6_cholesky.o hdf5_r6_correlation.o hdf5_r6_eigen.o hdf5_r6_matvec.o hdf5_r6_minimal.o hdf5_r6_multiply.o hdf5_r6_normalize.o hdf5_r6_omics.o hdf5_r6_pca.o hdf5_r6_pseudoinv.o hdf5_r6_qr.o hdf5_r6_reduce_apply.o hdf5_r6_sparse.o hdf5_r6_split.o hdf5_r6_subset.o hdf5_r6_svd.o hdf5_r6_write.o hdf5_reduceDataset.o hdf5_systemInfo.o hdf5_writeDimnames.o mem_blockmult.o mem_blocksubstract.o mem_blocksum.o mem_correlation.o mem_crossprod.o mem_scalarprod.o mem_tcrossprod.o mem_weightprod.o -lz -llapack -L/home/hornik/tmp/R-d-clang-21/lib -lRblas -L/usr/lib/llvm-21/lib/clang/21/lib/linux -L/usr/lib/llvm-21/lib -lflang_rt.runtime -lm /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib/libhdf5_cpp.a /home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib/libhdf5.a -L/home/hornik/lib/R/Library/4.7/x86_64-linux-gnu/Rhdf5lib/lib -lsz -lm -ldl -lcurl -lssl -lcrypto -L/home/hornik/tmp/R-d-clang-21/lib -lR installing to /srv/hornik/tmp/CRAN_pretest/BigDataStatMeth.Rcheck/00LOCK-BigDataStatMeth/00new/BigDataStatMeth/libs ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BigDataStatMeth)