* using log directory 'd:/RCompile/CRANincoming/R-devel/BigDataStatMeth.Rcheck'
* using R Under development (unstable) (2025-11-25 r89063 ucrt)
* using platform: x86_64-w64-mingw32
* R was compiled by
    gcc.exe (GCC) 14.3.0
    GNU Fortran (GCC) 14.3.0
* running under: Windows Server 2022 x64 (build 20348)
* using session charset: UTF-8
* checking for file 'BigDataStatMeth/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'BigDataStatMeth' version '1.0.0'
* package encoding: UTF-8
* checking CRAN incoming feasibility ... NOTE
Maintainer: 'Dolors Pelegri-Siso <dolors.pelegri@isglobal.org>'

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  HDF (3:57, 20:24, 26:38)
  Scalable (3:48)
  omics (27:56)
  scalable (19:30)

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2022-04-19 for policy violation.

  Using many threads, using far too much total CPU time.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking whether package 'BigDataStatMeth' can be installed ... OK
* used C++ compiler: 'g++.exe (GCC) 14.3.0'
* checking C++ specification ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking 'build' directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... NOTE
Non-standard file/directory found at top level:
  'cran-comments.md'
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking installed files from 'inst/doc' ... OK
* checking files in 'vignettes' ... OK
* checking examples ... [14s] NOTE
Examples with CPU (user + system) or elapsed time > 10s
                 user system elapsed
bdblockmult_hdf5  9.4   0.99    9.89
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes ... OK
* checking re-building of vignette outputs ... [39s] OK
* checking PDF version of manual ... [10s] WARNING
LaTeX errors when creating PDF version.
This typically indicates Rd problems.
LaTeX errors found:
! LaTeX Error: Unicode character ≠ (U+2260)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character λ (U+03BB)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character Σ (U+03A3)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character Σ (U+03A3)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character Σ (U+03A3)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
! LaTeX Error: Unicode character ⁺ (U+207A)
               not set up for use with LaTeX.

See the LaTeX manual or LaTeX Companion for explanation.
Type  H <return>  for immediate help.
* checking PDF version of manual without index ... ERROR
* checking HTML version of manual ... [14s] NOTE
Found the following HTML validation problems:
bdQR_hdf5.html:127:9 (bdQR_hdf5.Rd:49): Error: <outdataset> is not recognized!
bdQR_hdf5.html:127:9 (bdQR_hdf5.Rd:49): Warning: discarding unexpected <outdataset>
bdQR_hdf5.html:131:9 (bdQR_hdf5.Rd:52): Error: <outdataset> is not recognized!
bdQR_hdf5.html:131:9 (bdQR_hdf5.Rd:52): Warning: discarding unexpected <outdataset>
bdSplit_matrix_hdf5.html:156:10 (bdSplit_matrix_hdf5.Rd:50): Error: <outdataset> is not recognized!
bdSplit_matrix_hdf5.html:156:10 (bdSplit_matrix_hdf5.Rd:50): Warning: discarding unexpected <outdataset>
bdSplit_matrix_hdf5.html:156:38 (bdSplit_matrix_hdf5.Rd:50): Error: <outdataset> is not recognized!
bdSplit_matrix_hdf5.html:156:38 (bdSplit_matrix_hdf5.Rd:50): Warning: discarding unexpected <outdataset>
bdWrite_hdf5_dimnames.html:80:18 (bdWrite_hdf5_dimnames.Rd:28): Error: <dataset> is not recognized!
bdWrite_hdf5_dimnames.html:80:18 (bdWrite_hdf5_dimnames.Rd:28): Warning: discarding unexpected <dataset>
bdWrite_hdf5_dimnames.html:83:25 (bdWrite_hdf5_dimnames.Rd:30): Error: <dataset> is not recognized!
bdWrite_hdf5_dimnames.html:83:25 (bdWrite_hdf5_dimnames.Rd:30): Warning: discarding unexpected <dataset>
BigDataStatMeth.html:4261:9 (bdQR_hdf5.Rd:49): Error: <outdataset> is not recognized!
BigDataStatMeth.html:4261:9 (bdQR_hdf5.Rd:49): Warning: discarding unexpected <outdataset>
BigDataStatMeth.html:4265:9 (bdQR_hdf5.Rd:52): Error: <outdataset> is not recognized!
BigDataStatMeth.html:4265:9 (bdQR_hdf5.Rd:52): Warning: discarding unexpected <outdataset>
BigDataStatMeth.html:6050:10 (bdSplit_matrix_hdf5.Rd:50): Error: <outdataset> is not recognized!
BigDataStatMeth.html:6050:10 (bdSplit_matrix_hdf5.Rd:50): Warning: discarding unexpected <outdataset>
BigDataStatMeth.html:6050:38 (bdSplit_matrix_hdf5.Rd:50): Error: <outdataset> is not recognized!
BigDataStatMeth.html:6050:38 (bdSplit_matrix_hdf5.Rd:50): Warning: discarding unexpected <outdataset>
BigDataStatMeth.html:6504:18 (bdWrite_hdf5_dimnames.Rd:28): Error: <dataset> is not recognized!
BigDataStatMeth.html:6504:18 (bdWrite_hdf5_dimnames.Rd:28): Warning: discarding unexpected <dataset>
* DONE
Status: 1 ERROR, 1 WARNING, 4 NOTEs