requireNamespace("dplyr") requireNamespace("ggplot2") requireNamespace("dplyr") # Load in the test data beesFlagged <- BeeBDC::beesFlagged # Visualise all flags for each dataSource (simplified to the text before the first underscore) testOut <- plotFlagSummary( data = beesFlagged, # Colours in order of pass (TRUE), fail (FALSE), and NA flagColours = c("#127852", "#A7002D", "#BDBABB"), fileName = paste0("FlagsPlot_", Sys.Date(),".pdf"), outPath = tempdir(), width = 15, height = 9, GBIF = "GBIF", SCAN = "SCAN", iDigBio = "iDigBio", USGS = "USGS", ALA = "ALA", ASP = "ASP", CAES = "CAES", 'B. Mont.' = "BMont", 'B. Minkley' = "BMin", Ecd = "Ecd", Gaiarsa = "Gai", EPEL = "EPEL", returnPlot = TRUE ) # Test the expected results testthat::test_that("plotFlagSummary plot length match", { testthat::expect_equal(length(testOut), 9) }) # Test classes testthat::test_that("plotFlagSummary expected class", { testthat::expect_type(testOut, "list") }) testthat::test_that("plotFlagSummary expected class", { testthat::expect_equal(attributes(testOut)$class, c("gg","ggplot")) }) # Check directory that the plot was saved testthat::test_that("plotFlagSummary plot saved?", { testthat::expect_true(any(stringr::str_detect(list.files(tempdir()), "FlagsPlot_"))) })