R Under development (unstable) (2026-03-08 r89578 ucrt) -- "Unsuffered Consequences"
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> Sys.setenv("R_TESTS" = "")
> 
> library(BayesianTools)
> library(testthat)
> 
> test_check("BayesianTools")
[1] "Info is missing upper/lower/best. This can cause plotting and sensitivity analysis functions to fail. If you want to use those functions provide (plot)upper/lower/best either in createBayesianSetup or prior"
[1] "Info is missing upper/lower/best. This can cause plotting and sensitivity analysis functions to fail. If you want to use those functions provide (plot)upper/lower/best either in createBayesianSetup or prior"

 Running DEzs-MCMC, chain  1 iteration 6 of 6 . Current logp  -51.95822 -99.05915 -80.33534 . Please wait! 
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  DEzs 
# Nr. Chains:  3 
# Iterations per chain:  2 
# Rejection rate:  1 
# Effective sample size:  0 
# Runtime:  0.04  sec. 
 
# Parameters
      psf    MAP   2.5% median  97.5%
par 1  NA  0.427 -9.663 -2.456  0.427
par 2  NA  2.257 -8.471 -6.002  2.257
par 3  NA -8.099 -8.099 -7.101 -1.648
par 4  NA  1.315 -5.890  1.072  1.315

## DIC:  188.515 
## Convergence 
 Gelman Rubin multivariate psrf:   
 

 Running DEzs-MCMC, chain  1 iteration 12 of 12 . Current logp  -65.33025 -157.6812 -44.32337 . Please wait! 

 Running DEzs-MCMC, chain  2 iteration 12 of 12 . Current logp  -127.1605 -70.72191 -126.6391 . Please wait! 

 Running DEzs-MCMC, chain  3 iteration 12 of 12 . Current logp  -54.65597 -43.85935 -27.32553 . Please wait! 
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  DEzs 
# Nr. Chains:  9 
# Iterations per chain:  4 
# Rejection rate:  0.815 
# Effective sample size:  16 
# Runtime:  0.11  sec. 
 
# Parameters
        psf    MAP   2.5% median 97.5%
par 1 3.764  3.104 -6.017 -1.112 8.446
par 2 2.712 -2.489 -9.008 -1.777 8.548
par 3 4.590  0.755 -8.829  2.173 9.419
par 4 4.784  2.633 -9.939 -3.117 9.930

## DIC:  288.229 
## Convergence 
 Gelman Rubin multivariate psrf:  775622679 
 
## Correlations 
       par 1  par 2  par 3  par 4
par 1  1.000  0.540 -0.034 -0.043
par 2  0.540  1.000 -0.132  0.183
par 3 -0.034 -0.132  1.000 -0.354
par 4 -0.043  0.183 -0.354  1.000
[1] "checking AM"
[1] "checking DR"
[1] "checking DRAM"
[1] "checking Metropolis"
[1] "checking DE"
[1] "checking DEzs"
[1] "checking DREAM"
[1] "checking DREAMzs"
[1] "checking Twalk"
[1] "checking SMC"
BT runMCMC: trying to find optimal start and covariance values 
 Running Metropolis-MCMC, chain  iteration 100 of 100 . Current logp:  -4.05744  Please wait! 
[1] "mcmcSampler - you can use the following methods to summarize, plot or reduce this class:"
[1] getSample plot      print     summary  
see '?methods' for accessing help and source code
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  Metropolis 
# Nr. Chains:  1 
# Iterations per chain:  100 
# Rejection rate:  0.545 
# Effective sample size:  26 
# Runtime:  0.05  sec. 
 
# Parameters
      MAP   2.5% median 97.5%
par 1   0 -2.288 -0.584 0.973

## DIC:  3.667 
## Convergence 
 Gelman Rubin multivariate psrf:  Only one chain; convergence cannot be determined! 
 

 Running DEzs-MCMC, chain  1 iteration 102 of 102 . Current logp  -4.044726 -3.970181 -5.10153 . Please wait! 
[1] "mcmcSampler - you can use the following methods to summarize, plot or reduce this class:"
[1] getSample plot      print     summary  
see '?methods' for accessing help and source code
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  DEzs 
# Nr. Chains:  3 
# Iterations per chain:  34 
# Rejection rate:  0.778 
# Effective sample size:  35 
# Runtime:  0.04  sec. 
 
# Parameters
        psf   MAP   2.5% median 97.5%
par 1 1.576 0.105 -5.542 -0.033 4.248

## DIC:  14.182 
## Convergence 
 Gelman Rubin multivariate psrf:   
 
BT runMCMC: trying to find optimal start and covariance values 
 Running Metropolis-MCMC, chain  iteration 100 of 100 . Current logp:  -14.76794  Please wait! 
[1] "mcmcSampler - you can use the following methods to summarize, plot or reduce this class:"
[1] getSample plot      print     summary  
see '?methods' for accessing help and source code
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  Metropolis 
# Nr. Chains:  1 
# Iterations per chain:  100 
# Rejection rate:  0.717 
# Effective sample size:  26 
# Runtime:  0.05  sec. 
 
# Parameters
        MAP   2.5% median 97.5%
par 1 0.000 -1.959  0.005 1.832
par 2 0.001 -0.661  1.074 2.407
par 3 0.000 -1.746  0.285 1.572

## DIC:  11.998 
## Convergence 
 Gelman Rubin multivariate psrf:  Only one chain; convergence cannot be determined! 
 

 Running DEzs-MCMC, chain  1 iteration 102 of 102 . Current logp  -15.26568 -14.58412 -15.63863 . Please wait! 
[1] "mcmcSampler - you can use the following methods to summarize, plot or reduce this class:"
[1] getSample plot      print     summary  
see '?methods' for accessing help and source code
# # # # # # # # # # # # # # # # # # # # # # # # # 
## MCMC chain summary ## 
# # # # # # # # # # # # # # # # # # # # # # # # # 
 
# MCMC sampler:  DEzs 
# Nr. Chains:  3 
# Iterations per chain:  34 
# Rejection rate:  0.879 
# Effective sample size:  86 
# Runtime:  0.03  sec. 
 
# Parameters
        psf    MAP   2.5% median 97.5%
par 1 1.326  0.820 -0.602  0.820 6.732
par 2 1.198 -0.251 -8.121 -0.251 9.872
par 3 1.790 -2.224 -9.329 -2.317 1.147

## DIC:  61.118 
## Convergence 
 Gelman Rubin multivariate psrf:   
 
[ FAIL 0 | WARN 0 | SKIP 11 | PASS 30 ]

══ Skipped tests (11) ══════════════════════════════════════════════════════════
• On CRAN (10): 'test-correlationPlot.R:3:1', 'test-marginalLikelihood.R:3:1',
  'test-marginalPlot.R:3:1', 'test-plotTimeSeriesResults.R:3:1',
  'test-samplers.R:30:1', 'test-settingsDefault.R:3:1',
  'test-startValues.R:3:1', 'test-tracePlot.R:3:1', 'test-utilities.R:3:1',
  'test-utils-Numerics.R:3:1'
• empty test (1):

[ FAIL 0 | WARN 0 | SKIP 11 | PASS 30 ]
> 
> proc.time()
   user  system elapsed 
   3.31    0.40    3.70