* installing *source* package ‘BayesSurvive’ ...
** this is package ‘BayesSurvive’ version ‘0.1.0’
** using staged installation
** libs
using C compiler: ‘Debian clang version 19.1.7 (1+b1)’
using C++ compiler: ‘Debian clang version 19.1.7 (1+b1)’
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c RcppExports.cpp -o RcppExports.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c UpdateGamma_cpp.cpp -o UpdateGamma_cpp.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c UpdateRPlee11_cpp.cpp -o UpdateRPlee11_cpp.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c func_MCMC_graph_cpp.cpp -o func_MCMC_graph_cpp.o
clang-19 -std=gnu23 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -c init.c -o init.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c misc.cpp -o misc.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c settingInterval.cpp -o settingInterval.o
clang++-19 -std=gnu++17 -I"/home/hornik/tmp/R-d-clang-19/include" -DNDEBUG  -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/Rcpp/include' -I'/srv/hornik/tmp/CRAN_pretest/Library/RcppArmadillo/include' -I'/home/hornik/lib/R/Library/4.6/x86_64-linux-gnu/testthat/include' -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3   -fpic  -g -O3 -Wall -pedantic -Wno-missing-template-arg-list-after-template-kw -Wdeprecated-literal-operator  -c updateRP_genomic_cpp.cpp -o updateRP_genomic_cpp.o
clang++-19 -std=gnu++17 -shared -L/home/hornik/tmp/R-d-clang-19/lib -Wl,-O1 -o BayesSurvive.so RcppExports.o UpdateGamma_cpp.o UpdateRPlee11_cpp.o func_MCMC_graph_cpp.o init.o misc.o settingInterval.o updateRP_genomic_cpp.o -L/home/hornik/tmp/R-d-clang-19/lib -lR
installing to /srv/hornik/tmp/CRAN_pretest/BayesSurvive.Rcheck/00LOCK-BayesSurvive/00new/BayesSurvive/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Error: package or namespace load failed for ‘BayesSurvive’ in dyn.load(file, DLLpath = DLLpath, ...):
 unable to load shared object '/srv/hornik/tmp/CRAN_pretest/BayesSurvive.Rcheck/00LOCK-BayesSurvive/00new/BayesSurvive/libs/BayesSurvive.so':
  /srv/hornik/tmp/CRAN_pretest/BayesSurvive.Rcheck/00LOCK-BayesSurvive/00new/BayesSurvive/libs/BayesSurvive.so: undefined symbol: dgelsd_
Error: loading failed
Execution halted
ERROR: loading failed
* removing ‘/srv/hornik/tmp/CRAN_pretest/BayesSurvive.Rcheck/BayesSurvive’