* installing *source* package 'BayesMallowsSMC2' ...
** this is package 'BayesMallowsSMC2' version '0.2.0'
** using staged installation
** libs
specified C++17
using C++ compiler: 'g++.exe (GCC) 14.3.0'
using C++17
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c RcppExports.cpp -o RcppExports.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c all_topological_sorts.cpp -o all_topological_sorts.o
all_topological_sorts.cpp: In member function 'void Graph::alltopologicalSortUtil(std::vector<int, std::allocator<int> >&, std::vector<bool>&, long long int&, std::vector<arma::Col<int> >&, double)':
all_topological_sorts.cpp:40:22: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
   40 |   for (size_t i{}; i < n_items; i++) {
      |                    ~~^~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c data.cpp -o data.o
data.cpp: In constructor 'Rankings::Rankings(const Rcpp::List&, bool)':
data.cpp:24:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
   24 |     for(size_t i{}; i < nm.size(); i++) {
      |                     ~~^~~~~~~~~~~
data.cpp: In constructor 'PairwisePreferences::PairwisePreferences(const Rcpp::List&, const Rcpp::List&, const Rcpp::List&)':
data.cpp:60:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
   60 |     for(size_t i{}; i < nm.size(); i++) {
      |                     ~~^~~~~~~~~~~
data.cpp:77:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
   77 |     for(size_t i{}; i < nm.size(); i++) {
      |                     ~~^~~~~~~~~~~
data.cpp:88:23: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'R_xlen_t' {aka 'long long int'} [-Wsign-compare]
   88 |     for(size_t i{}; i < nm.size(); i++) {
      |                     ~~^~~~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c distances.cpp -o distances.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c misc.cpp -o misc.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c options.cpp -o options.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c parameter_tracer.cpp -o parameter_tracer.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c particle.cpp -o particle.o
particle.cpp: In member function 'void Particle::run_particle_filter(unsigned int, const Prior&, const std::unique_ptr<Data>&, const std::unique_ptr<PartitionFunction>&, const std::unique_ptr<Distance>&, const std::unique_ptr<Resampler>&, std::string, bool)':
particle.cpp:66:25: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'const int' [-Wsign-compare]
   66 |       for(size_t c{}; c < prior.n_clusters; c++) {
      |                       ~~^~~~~~~~~~~~~~~~~~
particle.cpp: In function 'double compute_log_Z(const std::vector<ParticleFilter>&, int)':
particle.cpp:161:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
  161 |   for(size_t s{}; s < max_time + 1; s++) {
      |                   ~~^~~~~~~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c partition_functions.cpp -o partition_functions.o
partition_functions.cpp: In member function 'virtual double Cayley::logz(double)':
partition_functions.cpp:25:19: warning: comparison of integer expressions of different signedness: 'int' and 'const unsigned int' [-Wsign-compare]
   25 |   for(int i{1}; i < n_items; ++i){
      |                 ~~^~~~~~~~~
partition_functions.cpp: In member function 'virtual double Hamming::logz(double)':
partition_functions.cpp:35:18: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   35 |   for(int i{}; i < (n_items + 1); ++i){
      |                ~~^~~~~~~~~~~~~~~
partition_functions.cpp: In member function 'virtual double Kendall::logz(double)':
partition_functions.cpp:46:19: warning: comparison of integer expressions of different signedness: 'int' and 'unsigned int' [-Wsign-compare]
   46 |   for(int i{1}; i < (n_items + 1); ++i){
      |                 ~~^~~~~~~~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c prior.cpp -o prior.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c progress_reporter.cpp -o progress_reporter.o
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c rejuvenate.cpp -o rejuvenate.o
rejuvenate.cpp: In member function 'bool Particle::rejuvenate(unsigned int, const Options&, const Prior&, const std::unique_ptr<Data>&, const std::unique_ptr<PartitionFunction>&, const std::unique_ptr<Distance>&, const std::unique_ptr<Resampler>&, const arma::vec&)':
rejuvenate.cpp:66:33: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'const int' [-Wsign-compare]
   66 |   for(size_t cluster{}; cluster < prior.n_clusters; cluster++) {
      |                         ~~~~~~~~^~~~~~~~~~~~~~~~~~
rejuvenate.cpp:104:35: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'const int' [-Wsign-compare]
  104 |     for(size_t cluster{}; cluster < prior.n_clusters; cluster++) {
      |                           ~~~~~~~~^~~~~~~~~~~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c resampler.cpp -o resampler.o
resampler.cpp: In function 'arma::ivec stratsys(int, arma::vec, bool)':
resampler.cpp:31:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
   31 |   for(size_t i{}; i < n_samples; i++) u(i) = (i + rn(i)) / n_samples;
      |                   ~~^~~~~~~~~~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c run_smc.cpp -o run_smc.o
run_smc.cpp: In function 'Rcpp::List run_smc(Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List, Rcpp::List)':
run_smc.cpp:44:21: warning: comparison of integer expressions of different signedness: 'size_t' {aka 'long long unsigned int'} and 'int' [-Wsign-compare]
   44 |   for(size_t t{}; t < T; t++) {
      |                   ~~^~~
g++  -std=gnu++17 -I"D:/RCompile/recent/R/include" -DNDEBUG  -I'D:/RCompile/CRANpkg/lib/4.6/Rcpp/include' -I'D:/RCompile/CRANpkg/lib/4.6/RcppArmadillo/include'   -I"d:/rtools45/x86_64-w64-mingw32.static.posix/include"   -fopenmp   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign    -c sample_latent_rankings.cpp -o sample_latent_rankings.o
g++ -shared -s -static-libgcc -o BayesMallowsSMC2.dll tmp.def RcppExports.o all_topological_sorts.o data.o distances.o misc.o options.o parameter_tracer.o particle.o partition_functions.o prior.o progress_reporter.o rejuvenate.o resampler.o run_smc.o sample_latent_rankings.o -fopenmp -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lquadmath -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools45/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR
installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-BayesMallowsSMC2/00new/BayesMallowsSMC2/libs/x64
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
*** copying figures
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (BayesMallowsSMC2)