* using log directory ‘/srv/hornik/tmp/CRAN/BRBVS.Rcheck’ * using R Under development (unstable) (2024-06-26 r86840) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.5 (2) Debian flang-new version 18.1.5 (2) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘BRBVS/DESCRIPTION’ ... OK * this is package ‘BRBVS’ version ‘0.1.1’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [4s/10s] WARNING Maintainer: ‘Danilo Petti ’ Insufficient package version (submitted: 0.1.1, existing: 0.1.1) Unknown, possibly misspelled, fields in DESCRIPTION: ‘References’ * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘BRBVS’ can be installed ... [7s/7s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [2s/2s] OK * checking whether the package can be loaded with stated dependencies ... [2s/2s] OK * checking whether the package can be unloaded cleanly ... [2s/2s] OK * checking whether the namespace can be loaded with stated dependencies ... [2s/2s] OK * checking whether the namespace can be unloaded cleanly ... [2s/2s] OK * checking loading without being on the library search path ... [2s/2s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [11s/11s] NOTE Select_link_BivCop: no visible binding for global variable ‘upperBt1’ backward_selection_BivCop: no visible binding for global variable ‘upperBt1’ forward_selection_BivCop: no visible binding for global variable ‘upperBt1’ Undefined global functions or variables: upperBt1 * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from Rd file 'Select_link_BivCop.Rd': Select_link_BivCop Code: function(data, cens1, cens2, lowerBt1 = "t11", lowerBt2 = "t21", pperBt1 = "t12", upperBt2 = "t22", measure = "AIC", eta1 = NULL, eta2 = NULL, input_equation = FALSE) Docs: function(data, cens1, cens2, lowerBt1, lowerBt2, upperBt1, upperBt2, measure = "AIC", eta1 = NULL, eta2 = NULL, input_equation = FALSE) Argument names in code not in docs: pperBt1 Argument names in docs not in code: upperBt1 Mismatches in argument names: Position: 6 Code: pperBt1 Docs: upperBt1 Mismatches in argument default values: Name: 'lowerBt1' Code: "t11" Docs: Name: 'lowerBt2' Code: "t21" Docs: Name: 'upperBt2' Code: "t22" Docs: Codoc mismatches from Rd file 'backward_selection_BivCop.Rd': backward_selection_BivCop Code: function(data, lowerBt1 = "t11", lowerBt2 = "t21", pperBt1 = "t12", upperBt2 = "t22", copula = "N", margins = c("PH", "PH"), measure = "AIC", cens1, cens2) Docs: function(data, lowerBt1, lowerBt2, upperBt1, upperBt2, copula = "N", margins = c("PH", "PH"), measure = "AIC", cens1, cens2) Argument names in code not in docs: pperBt1 Argument names in docs not in code: upperBt1 Mismatches in argument names: Position: 4 Code: pperBt1 Docs: upperBt1 Mismatches in argument default values: Name: 'lowerBt1' Code: "t11" Docs: Name: 'lowerBt2' Code: "t21" Docs: Name: 'upperBt2' Code: "t22" Docs: Codoc mismatches from Rd file 'forward_selection_BivCop.Rd': forward_selection_BivCop Code: function(data, lowerBt1 = "t11", lowerBt2 = "t21", pperBt1 = "t12", upperBt2 = "t22", copula = "N", margins = c("PH", "PH"), measure = "AIC", cens1, cens2) Docs: function(data, lowerBt1, lowerBt2, upperBt1, upperBt2, copula = "N", margins = c("PH", "PH"), measure = "AIC", cens1, cens2) Argument names in code not in docs: pperBt1 Argument names in docs not in code: upperBt1 Mismatches in argument names: Position: 4 Code: pperBt1 Docs: upperBt1 Mismatches in argument default values: Name: 'lowerBt1' Code: "t11" Docs: Name: 'lowerBt2' Code: "t21" Docs: Name: 'upperBt2' Code: "t22" Docs: * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking examples ... [4s/4s] OK * checking PDF version of manual ... [3s/3s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 2 WARNINGs, 1 NOTE