* using log directory 'd:/RCompile/CRANincoming/R-devel/BKT.Rcheck' * using R Under development (unstable) (2025-01-22 r87618 ucrt) * using platform: x86_64-w64-mingw32 * R was compiled by gcc.exe (GCC) 13.3.0 GNU Fortran (GCC) 13.3.0 * running under: Windows Server 2022 x64 (build 20348) * using session charset: UTF-8 * checking for file 'BKT/DESCRIPTION' ... OK * this is package 'BKT' version '0.0.1' * package encoding: UTF-8 * checking CRAN incoming feasibility ... NOTE Maintainer: 'Yuhao Yuan ' New submission Possibly misspelled words in DESCRIPTION: BKT (8:108, 8:252) * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking serialization versions ... OK * checking whether package 'BKT' can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking for future file timestamps ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... NOTE convert_data_path: no visible binding for global variable 'gs_ref' convert_data_path: no visible binding for global variable 'resource_ref' Undefined global functions or variables: gs_ref resource_ref * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Codoc mismatches from Rd file 'bkt.Rd': bkt Code: function(parallel = TRUE, num_fits = 5, folds = 5, seed = sample(1:1e+08, 1), model_type = rep(FALSE, 4), forgets = FALSE, fixed = NULL, defaults = NULL, ...) Docs: function(parallel = TRUE, num_fits = 5, folds = 5, seed = sample(1:1e+08, 1), model_type = rep(FALSE, 4), forgets = FALSE, fixed = NULL, ...) Argument names in code not in docs: defaults Mismatches in argument names: Position: 8 Code: defaults Docs: ... * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking examples ... OK * checking for unstated dependencies in 'tests' ... OK * checking tests ... ERROR Running 'testthat.R' Running the tests in 'tests/testthat.R' failed. Complete output: > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview > # * https://testthat.r-lib.org/articles/special-files.html > > library(testthat) > library(BKT) > > test_check("BKT") [ FAIL 1 | WARN 0 | SKIP 0 | PASS 6 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-usage_1.R:11:5'): test-usage_1 ───────────────────────────────── Error in `matrix(1, nrow = 2, ncol = T)`: invalid 'ncol' value (too large or NA) Backtrace: ▆ 1. └─BKT::fit(model, data_path = "ct.csv", skills = "Plot non-terminating improper fraction") at test-usage_1.R:11:5 2. └─BKT:::partial_fit(...) 3. └─BKT:::._fit(...) 4. └─BKT:::EM_fit(fitmodel, data, parallel = object@parallel, fixed = optional_args$fixed) 5. └─BKT:::run(...) 6. └─base::tryCatch(...) 7. └─base (local) tryCatchList(expr, classes, parentenv, handlers) 8. └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]]) 9. └─value[[3L]](cond) 10. └─base::lapply(thread_counts, inner) 11. └─BKT (local) FUN(X[[i]], ...) 12. └─base::matrix(1, nrow = 2, ncol = T) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 6 ] Error: Test failures Execution halted * checking PDF version of manual ... [13s] OK * checking HTML version of manual ... OK * DONE Status: 1 ERROR, 1 WARNING, 2 NOTEs