* installing *source* package 'BGLR' ... ** using staged installation ** libs using C compiler: 'gcc.exe (GCC) 12.3.0' gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util_sample.c -o util_sample.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util_plink.c -o util_plink.o util_plink.c: In function 'read_ped_': util_plink.c:229:51: warning: 'tmp' may be used uninitialized [-Wmaybe-uninitialized] 229 | if(tmp=='0' && token[0]=='0') | ^ util_plink.c:114:14: note: 'tmp' was declared here 114 | char tmp; | ^~~ util_plink.c:262:17: warning: 'Line_copy' may be used uninitialized [-Wmaybe-uninitialized] 262 | free(Line_copy); | ^~~~~~~~~~~~~~~ util_plink.c:105:15: note: 'Line_copy' was declared here 105 | char *Line_copy; | ^~~~~~~~~ util_plink.c:263:17: warning: 'Line' may be used uninitialized [-Wmaybe-uninitialized] 263 | free(Line); | ^~~~~~~~~~ util_plink.c:104:15: note: 'Line' was declared here 104 | char *Line; | ^~~~ gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util_sample_cross.c -o util_sample_cross.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c sampler_multitrait.c -o sampler_multitrait.o gcc -I"D:/RCompile/recent/R/include" -DNDEBUG -I"d:/rtools43/x86_64-w64-mingw32.static.posix/include" -I. -pedantic -Wstrict-prototypes -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c init.c -o init.o gcc -shared -s -static-libgcc -o BGLR.dll tmp.def util_sample.o util_plink.o util_sample_cross.o sampler_multitrait.o init.o -LD:/RCompile/recent/R/bin/x64 -lRlapack -LD:/RCompile/recent/R/bin/x64 -lRblas -lgfortran -lm -lquadmath -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -Ld:/rtools43/x86_64-w64-mingw32.static.posix/lib -LD:/RCompile/recent/R/bin/x64 -lR installing to d:/RCompile/CRANincoming/R-devel/lib/00LOCK-BGLR/00new/BGLR/libs/x64 ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BGLR)