downloading reverse dependencies ‘EMJMCMC’, ‘FBMS’, ‘ginormal’, ‘PEPBVS’ trying URL 'file:///data/Repositories/CRAN/src/contrib/EMJMCMC_1.5.0.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/FBMS_1.3.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/ginormal_0.0.2.tar.gz' trying URL 'file:///data/Repositories/CRAN/src/contrib/PEPBVS_2.2.tar.gz' installing dependencies ‘BAS’, ‘BayesVarSel’, ‘bindata’, ‘cAIC4’, ‘glmbb’, ‘r2r’, ‘tolerance’ begin installing package ‘glmbb’ begin installing package ‘BAS’ begin installing package ‘bindata’ begin installing package ‘r2r’ begin installing package ‘tolerance’ begin installing package ‘cAIC4’ begin installing package ‘BayesVarSel’ * installing *source* package ‘bindata’ ... ** this is package ‘bindata’ version ‘0.9-22’ ** package ‘bindata’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (bindata) * installing *source* package ‘glmbb’ ... ** this is package ‘glmbb’ version ‘0.5-1’ ** package ‘glmbb’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (glmbb) * installing *source* package ‘r2r’ ... ** this is package ‘r2r’ version ‘0.1.2’ ** package ‘r2r’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (r2r) * installing *source* package ‘cAIC4’ ... ** this is package ‘cAIC4’ version ‘1.1’ ** package ‘cAIC4’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (cAIC4) * installing *source* package ‘BAS’ ... ** this is package ‘BAS’ version ‘2.0.0’ ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ using Fortran compiler: ‘GNU Fortran (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpDDz247/R.INSTALL3b7b9052d93a11/BAS/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c E_ZS.c -o E_ZS.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c MH-funs.c -o MH-funs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ZS_approx_full_np.c -o ZS_approx_full_np.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c ZS_approx_null_np.c -o ZS_approx_null_np.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c amcmc-funs.c -o amcmc-funs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bayesglm.c -o bayesglm.o bayesglm.c: In function ‘glm_fit’: bayesglm.c:62:17: warning: variable ‘betapriorfamily’ set but not used [-Wunused-but-set-variable] 62 | betapriorptr *betapriorfamily; | ^~~~~~~~~~~~~~~ bayesglm.c:178:17: warning: ‘disp’ may be used uninitialized [-Wmaybe-uninitialized] 178 | se[j] = sqrt(se[j]*disp); | ^~~~~~~~~~~~~~~~ bayesglm.c:54:10: note: ‘disp’ was declared here 54 | double disp; | ^~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c bayesreg.c -o bayesreg.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c betapriorfamily.c -o betapriorfamily.o betapriorfamily.c: In function ‘intrinsic_glm_shrinkage’: betapriorfamily.c:239:38: warning: unused variable ‘u’ [-Wunused-variable] 239 | double a, b, s, r, v, theta, n, p, u, shrinkage; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c cch.c -o cch.o gfortran-15 -fpic -g -O2 -Wall -pedantic -mtune=native -c dch1up.f -o dch1up.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c family.c -o family.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_deterministic.c -o glm_deterministic.o glm_deterministic.c: In function ‘glm_deterministic’: glm_deterministic.c:55:35: warning: unused variable ‘logmargy’ [-Wunused-variable] 55 | double *probs,shrinkage_m,logmargy; | ^~~~~~~~ glm_deterministic.c:55:23: warning: unused variable ‘shrinkage_m’ [-Wunused-variable] 55 | double *probs,shrinkage_m,logmargy; | ^~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_fit.c -o glm_fit.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_mcmc.c -o glm_mcmc.o glm_mcmc.c: In function ‘glm_mcmc’: glm_mcmc.c:17:39: warning: variable ‘shrinkage_m’ set but not used [-Wunused-but-set-variable] 17 | double *probs, MH=0.0, prior_m=1.0, shrinkage_m, logmargy, postold, postnew; | ^~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_mcmc_grow.c -o glm_mcmc_grow.o glm_mcmc_grow.c: In function ‘glm_mcmc_grow’: glm_mcmc_grow.c:108:45: warning: variable ‘shrinkage_m’ set but not used [-Wunused-but-set-variable] 108 | double *probs, MH=0.0, prior_m=1.0, shrinkage_m, logmarg_m, postold, postnew; | ^~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_mcmcbas.c -o glm_mcmcbas.o glm_mcmcbas.c: In function ‘glm_mcmcbas’: glm_mcmcbas.c:46:44: warning: variable ‘shrinkage_m’ set but not used [-Wunused-but-set-variable] 46 | double *probs, MH=0.0, prior_m=1.0,shrinkage_m, logmargy, postold, postnew; | ^~~~~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_sampleworep.c -o glm_sampleworep.o glm_sampleworep.c: In function ‘glm_sampleworep’: glm_sampleworep.c:109:33: warning: variable ‘shrinkage_m’ set but not used [-Wunused-but-set-variable] 109 | double *probs,logmargy, shrinkage_m; | ^~~~~~~~~~~ glm_sampleworep.c:109:23: warning: variable ‘logmargy’ set but not used [-Wunused-but-set-variable] 109 | double *probs,logmargy, shrinkage_m; | ^~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c glm_sampleworep_grow.c -o glm_sampleworep_grow.o glm_sampleworep_grow.c: In function ‘glm_sampleworep_grow’: glm_sampleworep_grow.c:90:33: warning: variable ‘shrinkage_m’ set but not used [-Wunused-but-set-variable] 90 | double *probs,logmargy, shrinkage_m; | ^~~~~~~~~~~ glm_sampleworep_grow.c:90:23: warning: variable ‘logmargy’ set but not used [-Wunused-but-set-variable] 90 | double *probs,logmargy, shrinkage_m; | ^~~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hg_approx_null_np.c -o hg_approx_null_np.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hyp1F1.c -o hyp1F1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hyp2f1.c -o hyp2f1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hypergeometric1F1.c -o hypergeometric1F1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c hypergeometric2F1.c -o hypergeometric2F1.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c init.c -o init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_amcmc.c -o lm_amcmc.o lm_amcmc.c: In function ‘amcmc’: lm_amcmc.c:337:35: warning: ‘new_loc’ may be used uninitialized [-Wmaybe-uninitialized] 337 | INTEGER(Rcounts)[old_loc] += 1; | ~~~~~~~~~~~~~~~~^~~~~~~~~ lm_amcmc.c:240:13: note: ‘new_loc’ was declared here 240 | int new_loc; | ^~~~~~~ lm_amcmc.c:434:34: warning: ‘postold’ may be used uninitialized [-Wmaybe-uninitialized] 434 | if (!IS) MH = exp(postnew - postold + log(pigammaold) - log(pigammanew)); | ~~~~~~~~^~~~~~~~~ lm_amcmc.c:124:47: note: ‘postold’ was declared here 124 | R2_m, RSquareFull, logmarg_m, postold, postnew; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_amcmc_growable.c -o lm_amcmc_growable.o lm_amcmc_growable.c: In function ‘amcmc_grow’: lm_amcmc_growable.c:321:35: warning: ‘new_loc’ may be used uninitialized [-Wmaybe-uninitialized] 321 | INTEGER(Rcounts)[old_loc] += 1; | ~~~~~~~~~~~~~~~~^~~~~~~~~ lm_amcmc_growable.c:224:13: note: ‘new_loc’ was declared here 224 | int new_loc; | ^~~~~~~ lm_amcmc_growable.c:464:34: warning: ‘postold’ may be used uninitialized [-Wmaybe-uninitialized] 464 | if (!IS) MH = exp(postnew - postold + log(pigammaold) - log(pigammanew)); | ~~~~~~~~^~~~~~~~~ lm_amcmc_growable.c:110:47: note: ‘postold’ was declared here 110 | R2_m, RSquareFull, logmarg_m, postold, postnew; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_deterministic.c -o lm_deterministic.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_mcmc.c -o lm_mcmc.o lm_mcmc.c: In function ‘mcmc’: lm_mcmc.c:127:13: warning: unused variable ‘k’ [-Wunused-variable] 127 | int k = LENGTH(modelprobs); | ^ lm_mcmc.c:302:35: warning: ‘new_loc’ may be used uninitialized [-Wmaybe-uninitialized] 302 | INTEGER(Rcounts)[old_loc] += 1; | ~~~~~~~~~~~~~~~~^~~~~~~~~ lm_mcmc.c:206:13: note: ‘new_loc’ was declared here 206 | int new_loc; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_mcmc_grow.c -o lm_mcmc_grow.o lm_mcmc_grow.c: In function ‘mcmc_grow’: lm_mcmc_grow.c:296:35: warning: ‘new_loc’ may be used uninitialized [-Wmaybe-uninitialized] 296 | INTEGER(Rcounts)[old_loc] += 1; | ~~~~~~~~~~~~~~~~^~~~~~~~~ lm_mcmc_grow.c:201:13: note: ‘new_loc’ was declared here 201 | int new_loc; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_mcmcbas.c -o lm_mcmcbas.o lm_mcmcbas.c: In function ‘mcmcbas’: lm_mcmcbas.c:285:22: warning: ‘new_loc’ may be used uninitialized [-Wmaybe-uninitialized] 285 | INTEGER(counts)[old_loc] += 1; | ~~~~~~~~~~~~~~~^~~~~~~~~ lm_mcmcbas.c:182:9: note: ‘new_loc’ was declared here 182 | int new_loc; | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_sampleworep-grow.c -o lm_sampleworep-grow.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c lm_sampleworep.c -o lm_sampleworep.o lm_sampleworep.c: In function ‘sampleworep_new’: lm_sampleworep.c:36:13: warning: unused variable ‘nModels’ [-Wunused-variable] 36 | int nModels=LENGTH(Rmodeldim); | ^~~~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mem.c -o mem.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c model_probabilities.c -o model_probabilities.o model_probabilities.c: In function ‘compute_margprobs_Bayes_BAS_MCMC’: model_probabilities.c:129:17: warning: unused variable ‘probNotInS’ [-Wunused-variable] 129 | double *beta, probNotInS = 1.0; | ^~~~~~~~~~ In file included from bas.h:23, from model_probabilities.c:6: /home/hornik/tmp/R-d-gcc-15/include/Rmath.h:221:25: warning: unused variable ‘Rf_beta’ [-Wunused-variable] 221 | #define beta Rf_beta | ^~~~~~~ model_probabilities.c:129:11: note: in expansion of macro ‘beta’ 129 | double *beta, probNotInS = 1.0; | ^~~~ model_probabilities.c:127:22: warning: unused variable ‘n’ [-Wunused-variable] 127 | int m, j, *model, *n; | ^ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mtherr.c -o mtherr.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c resizeVectors.c -o resizeVectors.o resizeVectors.c: In function ‘resizeVector’: resizeVectors.c:78:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 78 | for (i = 0; i < len_new; i++) | ^~~ resizeVectors.c:86:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 86 | break; | ^~~~~ resizeVectors.c:88:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 88 | for (i = 0; i < len_new; i++) | ^~~ resizeVectors.c:94:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 94 | break; | ^~~~~ resizeVectors.c:102:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 102 | for (i = 0; i < len_new; i++) | ^~~ resizeVectors.c:106:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 106 | break; | ^~~~~ resizeVectors.c:108:3: warning: this ‘for’ clause does not guard... [-Wmisleading-indentation] 108 | for (i = 0; i < len_new; i++) | ^~~ resizeVectors.c:114:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the ‘for’ 114 | break; | ^~~~~ gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c tree_structures.c -o tree_structures.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o BAS.so E_ZS.o MH-funs.o ZS_approx_full_np.o ZS_approx_null_np.o amcmc-funs.o bayesglm.o bayesreg.o betapriorfamily.o cch.o dch1up.o family.o glm_deterministic.o glm_fit.o glm_mcmc.o glm_mcmc_grow.o glm_mcmcbas.o glm_sampleworep.o glm_sampleworep_grow.o hg_approx_null_np.o hyp1F1.o hyp2f1.o hypergeometric1F1.o hypergeometric2F1.o init.o lm_amcmc.o lm_amcmc_growable.o lm_deterministic.o lm_mcmc.o lm_mcmc_grow.o lm_mcmcbas.o lm_sampleworep-grow.o lm_sampleworep.o mem.o model_probabilities.o mtherr.o resizeVectors.o tree_structures.o -llapack -L/home/hornik/tmp/R-d-gcc-15/lib -lRblas -lgfortran -lm -lquadmath -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpDDz247/R.INSTALL3b7b9052d93a11/BAS/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-BAS/00new/BAS/libs ** R ** data ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BAS) * installing *source* package ‘tolerance’ ... ** this is package ‘tolerance’ version ‘3.0.0’ ** package ‘tolerance’ successfully unpacked and MD5 sums checked ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (tolerance) * installing *source* package ‘BayesVarSel’ ... ** this is package ‘BayesVarSel’ version ‘2.4.5’ ** package ‘BayesVarSel’ successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: ‘gcc-15 (Debian 15.2.0-9) 15.2.0’ make[1]: Entering directory '/home/hornik/tmp/scratch/RtmpWanTn8/R.INSTALL3b7b9465e75651/BayesVarSel/src' gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c BayesVarSel_init.c -o BayesVarSel_init.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c Gibbsauxiliaryfuncs.c -o Gibbsauxiliaryfuncs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c allBF.c -o allBF.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c auxiliaryfuncs.c -o auxiliaryfuncs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c main.c -o main.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mainGibbs.c -o mainGibbs.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mainGibbsF.c -o mainGibbsF.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c mainSingle.c -o mainSingle.o gcc-15 -I"/home/hornik/tmp/R-d-gcc-15/include" -DNDEBUG -I/usr/local/include -DUSE_TYPE_CHECKING_STRICT -D_FORTIFY_SOURCE=3 -fpic -g -O2 -Wall -Wstrict-prototypes -pedantic -mtune=native -c priorprob.c -o priorprob.o gcc-15 -shared -L/home/hornik/tmp/R-d-gcc-15/lib -Wl,-O1 -o BayesVarSel.so BayesVarSel_init.o Gibbsauxiliaryfuncs.o allBF.o auxiliaryfuncs.o main.o mainGibbs.o mainGibbsF.o mainSingle.o priorprob.o -L/usr/local/lib -lgsl -lgslcblas -lm -L/home/hornik/tmp/R-d-gcc-15/lib -lR make[1]: Leaving directory '/home/hornik/tmp/scratch/RtmpWanTn8/R.INSTALL3b7b9465e75651/BayesVarSel/src' installing to /home/hornik/tmp/CRAN_recheck/Library/00LOCK-BayesVarSel/00new/BayesVarSel/libs ** R ** data *** moving datasets to lazyload DB ** demo ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** testing if installed package can be loaded from temporary location ** checking absolute paths in shared objects and dynamic libraries ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (BayesVarSel) checking BAS_2.0.0.tar.gz ... checking EMJMCMC_1.5.0.tar.gz ... checking FBMS_1.3.tar.gz ... checking ginormal_0.0.2.tar.gz ... checking PEPBVS_2.2.tar.gz ... Depends: Package: BAS Depends: R (>= 3.0) Imports: stats, graphics, utils, grDevices Timings: user system elapsed BAS 125.784 8.112 135.727 Results: Check status summary: NOTE OK Source packages 0 1 Reverse depends 1 3 Check results summary: BAS ... OK rdepends_EMJMCMC ... OK rdepends_FBMS ... OK rdepends_ginormal ... NOTE * checking DESCRIPTION meta-information ... NOTE rdepends_PEPBVS ... OK