* using log directory ‘/srv/hornik/tmp/CRAN_pretest/AnalyzeFMRI.Rcheck’
* using R Under development (unstable) (2025-07-09 r88393)
* using platform: x86_64-pc-linux-gnu
* R was compiled by
    Debian clang version 19.1.7 (3)
    Debian flang-new version 19.1.7 (3)
* running under: Debian GNU/Linux 13 (trixie)
* using session charset: UTF-8
* checking for file ‘AnalyzeFMRI/DESCRIPTION’ ... OK
* this is package ‘AnalyzeFMRI’ version ‘1.1-25’
* checking CRAN incoming feasibility ... [3s/4s] NOTE
Maintainer: ‘Pierre Lafaye De Micheaux <lafaye@unsw.edu.au>’

New submission

Package was archived on CRAN

Possibly misspelled words in DESCRIPTION:
  NIFTI (5:9, 24:142)
  XQuartz (24:188)

CRAN repository db overrides:
  X-CRAN-Comment: Archived on 2022-03-15 as check problems were not
    corrected despite months of notice.

  Still using S.h, unsupported since 2016-01.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘AnalyzeFMRI’ can be installed ... [21s/16s] OK
* used C compiler: ‘Debian clang version 19.1.7 (3+b1)’
* used Fortran compiler: ‘Debian flang-new version 19.1.7 (3+b1)’
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking code files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... [0s/0s] OK
* checking whether the package can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the package can be unloaded cleanly ... [0s/0s] OK
* checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK
* checking whether the namespace can be unloaded cleanly ... [0s/0s] OK
* checking loading without being on the library search path ... [0s/0s] OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... [8s/8s] OK
* checking Rd files ... [0s/0s] OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in shell scripts ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK
* checking pragmas in C/C++ headers and code ... OK
* checking compilation flags used ... OK
* checking compiled code ... OK
* checking usage of KIND in Fortran files ... OK
* checking examples ... [6s/6s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ... [1s/1s] NOTE
  Running ‘test.R’ [0s/0s]
  Comparing ‘test.Rout’ to ‘test.Rout.save’ ...8c8
< R.matlab v3.7.0 (2022-08-25 21:52:34 UTC) successfully loaded. See ?R.matlab for help.
---
> R.matlab v3.6.1 (2016-10-19) successfully loaded. See ?R.matlab for help.
* checking PDF version of manual ... [4s/4s] OK
* checking HTML version of manual ... [2s/2s] OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE
Status: 2 NOTEs