R Under development (unstable) (2025-04-21 r88169 ucrt) -- "Unsuffered Consequences" Copyright (C) 2025 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > # This file is part of the standard setup for testthat. > # It is recommended that you do not modify it. > # > # Where should you do additional test configuration? > # Learn more about the roles of various files in: > # * https://r-pkgs.org/tests.html > # * https://testthat.r-lib.org/reference/test_package.html#special-files > > library(AnalyzAIRR) Loading required package: data.table > > testthat::test_check("AnalyzAIRR") Running on 1 cores... Loading and filtering sequences... Der Befehl "gunzip" ist entweder falsch geschrieben oder konnte nicht gefunden werden. [ FAIL 1 | WARN 2 | SKIP 0 | PASS 3 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-loadData.R:12:3'): multiplication works ──────────────────────── Error in ``[.data.table`(tab, , ..keep.cols)`: columns not found: [junction, junction_aa, v_call, j_call, consensus_count] Backtrace: ▆ 1. └─AnalyzAIRR::readAIRRSet(...) at test-loadData.R:12:3 2. └─base::lapply(...) 3. └─AnalyzAIRR (local) FUN(X[[i]], ...) 4. └─AnalyzAIRR::parseAIRRC(path, chain = ch) 5. ├─tab[, ..keep.cols] 6. └─data.table:::`[.data.table`(tab, , ..keep.cols) 7. └─data.table:::stopf(...) 8. └─data.table:::raise_condition(...) [ FAIL 1 | WARN 2 | SKIP 0 | PASS 3 ] Error: Test failures Execution halted