R Under development (unstable) (2026-09-21 r90579 ucrt) -- "Unsuffered Consequences"
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Platform: x86_64-w64-mingw32/x64

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> library(testthat)
> library(AlphaSDM)
> 
> test_check("AlphaSDM")
    ‣ Watch batch tasks live: https://code.earthengine.google.com/tasks
      ‣ export queued server-side ... (0s elapsed)
      ‣ export queued server-side ... (0s elapsed)
      ‣ export running server-side ... (0s elapsed)
      ‣ export queued server-side ... (0s elapsed)
      ‣ export queued server-side ... (0s elapsed)
      ‣ export queued server-side ... (0s elapsed)
      ‣ export running server-side ... (0s elapsed)
      ‣ export running server-side ... (0s elapsed)
      ‣ export running server-side ... (0s elapsed)

┌─ Data Standardization ──────────────────────────────────────
    ‣ Validating coordinates: longitude, latitude
    ‣ Standardizing time/dates using column: year
  ! No 'presence' column supplied; treating all records as presence-only
    ‣ Filtering for Alpha Earth coverage (2017-2025)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 2 rows × 4 columns (longitude, latitude, year, present)
  ✔ Data ready: 3 rows × 4 columns (longitude, latitude, year, present)
  ✔ Data ready: 2 rows × 4 columns (longitude, latitude, year, present)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 3 rows × 4 columns (longitude, latitude, year, present)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 3 rows × 4 columns (longitude, latitude, year, present)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 1 rows × 4 columns (longitude, latitude, year, present)
  ✔ Data ready: 3 rows × 4 columns (longitude, latitude, year, present)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 2 rows × 4 columns (longitude, latitude, year, present)
  ✔ Data ready: 3 rows × 5 columns (longitude, latitude, year, present, species)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 0 rows × 4 columns (longitude, latitude, year, present)
  ! Presence-only records: generate pseudo-absences before modelling —
    ‣ pa <- generate_pseudo_absences(this_data, aoi = ..., strategy = ...)
  ✔ Data ready: 2 rows × 4 columns (longitude, latitude, year, present)
[ FAIL 0 | WARN 0 | SKIP 3 | PASS 115 ]

══ Skipped tests (3) ═══════════════════════════════════════════════════════════
• live GEE test (3): 'test-background.R:23:3', 'test-readme-workflow.R:7:3',
  'test-vignette.R:8:3'

[ FAIL 0 | WARN 0 | SKIP 3 | PASS 115 ]
> 
> proc.time()
   user  system elapsed 
   2.48    0.51    3.00