R Under development (unstable) (2024-02-19 r85946 ucrt) -- "Unsuffered Consequences" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-w64-mingw32/x64 R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > library(testthat) > # library(ActiveDriverWGS) > > test_check("ActiveDriverWGS") Loading required package: ActiveDriverWGS 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels .0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels Number of Elements with 0 Mutations: 0 Tests to do: 11 ...........reversing 0 positions Removing 0 invalid SNVs & indels reversing 0 positions Removing 0 invalid SNVs & indels 28 remove hypermut, n= 58256 , 100 % hypermuted samples: 001-0002-03TD 003-0005-09TD 012-02-1TD 125 128 137 141 151 178 192 26 277 282 294 306 308 318 342 343 367 393 467 473 477 519 523 564 CLL4-ARTICLE 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 0 remove hypermut, n= 0 , 0 % hypermuted samples: reversing 0 positions Removing 0 invalid SNVs & indels 1189 Rows :: Processing row 100 200 300 400 500 600 700 800 900 1000 1100 Preparing Elements Complete RM 0 lines Preparing Elements Complete RM 0 lines 5 Rows :: Processing row 5 Rows :: Processing row 5 Rows :: Processing row [ FAIL 0 | WARN 0 | SKIP 0 | PASS 110 ] > > proc.time() user system elapsed 30.14 3.31 33.43