* using log directory ‘/srv/hornik/tmp/CRAN/ATE.ERROR.Rcheck’ * using R Under development (unstable) (2024-08-23 r87049) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 18.1.8 (9) Debian flang-new version 18.1.8 (9) * running under: Debian GNU/Linux trixie/sid * using session charset: UTF-8 * checking for file ‘ATE.ERROR/DESCRIPTION’ ... OK * this is package ‘ATE.ERROR’ version ‘1.0.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/3s] NOTE Maintainer: ‘Aryan Rezanezhad ’ New submission Possibly misspelled words in DESCRIPTION: Shu (9:218) Yi (9:226) mismeasured (4:9) The Title field should be in title case. Current version is: ‘ATE.ERROR.Y and ATE.ERROR.XY: R Packages for Estimation of Average Treatment Effect with misclassified outcomes and mismeasured covariates’ In title case that is: ‘ATE.ERROR.Y and ATE.ERROR.XY: R Packages for Estimation of Average Treatment Effect with Misclassified Outcomes and Mismeasured Covariates’ Found the following URLs which should use \doi (with the DOI name only): File ‘Simulated_data.Rd’: https://doi.org/10.1002/sim.8073 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking serialization versions ... OK * checking whether package ‘ATE.ERROR’ can be installed ... [2s/2s] OK * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... NOTE Authors@R field gives persons with invalid ORCID identifiers: Aryan Rezanezhad [aut, cre] (YOUR-ORCID-ID) Author field differs from that derived from Authors@R Author: ‘Aryan Rezanezhad, Grace Y. Yi’ Authors@R: ‘Aryan Rezanezhad [aut, cre] (YOUR-ORCID-ID)’ * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [0s/0s] OK * checking whether the package can be unloaded cleanly ... [0s/0s] OK * checking whether the namespace can be loaded with stated dependencies ... [0s/0s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [3s/3s] OK * checking Rd files ... [0s/0s] OK * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking LazyData ... OK * checking data for ASCII and uncompressed saves ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... [1s/1s] OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [30m/30m] ERROR Error(s) in re-building vignettes: ... --- re-building ‘ATE.ERROR.XY.Rmd’ using rmarkdown Quitting from lines 56-60 [unnamed-chunk-3] (ATE.ERROR.XY.Rmd) Execution halted --- re-building ‘ATE.ERROR.Y.Rmd’ using rmarkdown ** Processing: /srv/hornik/tmp/CRAN/ATE.ERROR.Rcheck/vign_test/ATE.ERROR/vignettes/ATE.ERROR.Y_files/figure-html/unnamed-chunk-5-1.png 576x384 pixels, 3x8 bits/pixel, RGB Input IDAT size = 17753 bytes Input file size = 17855 bytes Trying: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14182 zc = 9 zm = 8 zs = 1 f = 0 zc = 1 zm = 8 zs = 2 f = 0 zc = 9 zm = 8 zs = 3 f = 0 zc = 9 zm = 8 zs = 0 f = 5 zc = 9 zm = 8 zs = 1 f = 5 zc = 1 zm = 8 zs = 2 f = 5 zc = 9 zm = 8 zs = 3 f = 5 Selecting parameters: zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14182 Output IDAT size = 14182 bytes (3571 bytes decrease) Output file size = 14260 bytes (3595 bytes = 20.13% decrease) --- finished re-building ‘ATE.ERROR.Y.Rmd’ --- re-building ‘Naive.Rmd’ using rmarkdown --- finished re-building ‘Naive.Rmd’ --- re-building ‘True.Rmd’ using rmarkdown --- finished re-building ‘True.Rmd’ SUMMARY: processing the following file failed: ‘ATE.ERROR.XY.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [3s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 2 NOTEs