* using log directory ‘/srv/hornik/tmp/CRAN_pretest/APRScenario.Rcheck’ * using R Under development (unstable) (2025-06-27 r88363) * using platform: x86_64-pc-linux-gnu * R was compiled by Debian clang version 19.1.7 (3) Debian flang-new version 19.1.7 (3) * running under: Debian GNU/Linux 13 (trixie) * using session charset: UTF-8 * checking for file ‘APRScenario/DESCRIPTION’ ... OK * this is package ‘APRScenario’ version ‘0.0.3.0’ * package encoding: UTF-8 * checking CRAN incoming feasibility ... [3s/4s] NOTE Maintainer: ‘Giovanni Lombardo ’ New submission * checking package namespace information ... OK * checking package dependencies ... INFO Package in Depends/Imports which should probably only be in LinkingTo: ‘RcppArmadillo’ * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for executable files ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘APRScenario’ can be installed ... [18s/18s] OK * used C++ compiler: ‘Debian clang version 19.1.7 (3+b1)’ * checking package directory ... OK * checking for future file timestamps ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... NOTE Non-standard files/directories found at top level: ‘debug_dimensions.R’ ‘original_backup’ ‘test_workflow.R’ * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking code files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... [1s/1s] OK * checking whether the package can be loaded with stated dependencies ... [1s/1s] OK * checking whether the package can be unloaded cleanly ... [1s/1s] OK * checking whether the namespace can be loaded with stated dependencies ... [1s/1s] OK * checking whether the namespace can be unloaded cleanly ... [1s/1s] OK * checking loading without being on the library search path ... [1s/1s] OK * checking use of S3 registration ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... [5s/5s] NOTE gen_mats: no visible binding for '<<-' assignment to ‘M_inv’ gen_mats: no visible binding for '<<-' assignment to ‘M_list’ gen_mats: no visible binding for '<<-' assignment to ‘M’ gen_mats: no visible binding for '<<-' assignment to ‘B’ gen_mats: no visible binding for '<<-' assignment to ‘intercept’ gen_mats: no visible binding for '<<-' assignment to ‘B_list’ gen_mats: no visible binding for '<<-' assignment to ‘Y’ gen_mats: no visible binding for '<<-' assignment to ‘XX’ gen_mats: no visible binding for '<<-' assignment to ‘Z’ * checking Rd files ... [0s/0s] NOTE checkRd: (-1) mat_forc.Rd:11: Lost braces; missing escapes or markup? 11 | M is reduced so that E(u\emph{u')=Sigma=(A_0}A_0')^{-1} and M_0=A_0^{-1}*Q # | ^ checkRd: (-1) mat_forc.Rd:11: Lost braces; missing escapes or markup? 11 | M is reduced so that E(u\emph{u')=Sigma=(A_0}A_0')^{-1} and M_0=A_0^{-1}*Q # | ^ checkRd: (-1) mat_forc.Rd:13: Lost braces; missing escapes or markup? 13 | B=>A_0^{-1}*Q and # | ^ checkRd: (-1) mat_forc.Rd:43: Lost braces; missing escapes or markup? 43 | M is reduced so that E(u\emph{u')=Sigma=(A_0}A_0')^{-1} and M_0=A_0^{-1}*Q # | ^ checkRd: (-1) mat_forc.Rd:43: Lost braces; missing escapes or markup? 43 | M is reduced so that E(u\emph{u')=Sigma=(A_0}A_0')^{-1} and M_0=A_0^{-1}*Q # | ^ checkRd: (-1) mat_forc.Rd:45: Lost braces; missing escapes or markup? 45 | B=>A_0^{-1}*Q and # | ^ * checking Rd metadata ... OK * checking Rd line widths ... OK * checking Rd cross-references ... OK * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... WARNING Variables with usage in Rd file 'NKdata.Rd' but not in code: ‘NKdata’ * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... [0s/0s] OK * checking data for ASCII and uncompressed saves ... OK * checking line endings in C/C++/Fortran sources/headers ... OK * checking line endings in Makefiles ... OK * checking compilation flags in Makevars ... OK * checking for GNU extensions in Makefiles ... OK * checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK * checking use of PKG_*FLAGS in Makefiles ... OK * checking use of SHLIB_OPENMP_*FLAGS in Makefiles ... OK * checking pragmas in C/C++ headers and code ... OK * checking compilation flags used ... OK * checking compiled code ... OK * checking installed files from ‘inst/doc’ ... OK * checking files in ‘vignettes’ ... OK * checking examples ... NONE * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... [1s/1s] OK Running ‘testthat.R’ [1s/1s] * checking for unstated dependencies in vignettes ... OK * checking package vignettes ... OK * checking re-building of vignette outputs ... [2s/2s] ERROR Error(s) in re-building vignettes: ... --- re-building ‘APRScenario.Rmd’ using rmarkdown Quitting from APRScenario.Rmd:304-359 [estimate-BVAR] ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: ! 'estimate' is not an exported object from 'namespace:bsvarSIGNs' ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ Error: processing vignette 'APRScenario.Rmd' failed with diagnostics: 'estimate' is not an exported object from 'namespace:bsvarSIGNs' --- failed re-building ‘APRScenario.Rmd’ SUMMARY: processing the following file failed: ‘APRScenario.Rmd’ Error: Vignette re-building failed. Execution halted * checking PDF version of manual ... [2s/2s] OK * checking HTML version of manual ... [0s/0s] OK * checking for non-standard things in the check directory ... OK * checking for detritus in the temp directory ... OK * DONE Status: 1 ERROR, 1 WARNING, 4 NOTEs